New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 14 | = 27531 | 3 (0.050) | 57 (0.860) | 47/198 | 0.8 | 97.5% | intergenic (–/–) | –/– | –/– |
? | 222 | = 1442 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GCTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 14/27432‑27531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCT < 222/1442‑1352 GCTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTG < 1:1167664/101‑1 CTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGT > 2:275990/1‑101 ACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCC > 1:1107553/1‑101 GGTATTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAA > 2:1212252/1‑101 GTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCgttgctca < 2:816740/101‑9 TTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGT < 1:1431709/101‑1 TTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTT < 1:928131/101‑1 TTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTG < 1:210899/101‑1 GGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGA < 2:1568354/101‑1 GCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGAC < 1:1202882/101‑1 CCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACA < 2:1516083/101‑1 CCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACA < 2:446384/101‑1 CTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAG > 1:611080/1‑101 CTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAG < 2:611075/101‑1 CTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGA‑ACCAAAAAGTTGGACAGT > 1:1606422/1‑101 CGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTT < 2:697752/101‑1 GTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 2:1691672/1‑101 GTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 2:1096965/1‑101 GTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:368187/1‑101 TGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA > 2:532691/1‑101 ACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 2:660611/1‑101 GCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG < 1:103637/101‑1 AACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA < 1:1018927/101‑1 CAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:1222033/101‑1 CAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:844336/1‑101 CAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:388992/1‑101 AATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 2:1566022/1‑101 ATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:368810/101‑1 CGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT > 2:1270086/1‑101 CCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 1:683380/1‑101 AACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT < 2:310111/101‑1 ATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCG > 1:694845/1‑101 AGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 1:1322843/1‑101 GCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTC < 2:368187/101‑1 GATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAA > 1:229438/1‑101 GATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAA > 2:1039056/1‑101 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT < 2:869769/101‑1 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT < 1:1039717/101‑1 ATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACACCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT > 2:1243925/1‑101 ACTGAACGCTTTGTCGCGTCGCACATGGCGTTTTGTACTGAACCCAAAAAGTTGGAAAGTTAAACCCGAGGCATATAGGTCTGATTCCGATATTCAATTGG < 2:761073/101‑1 CTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA > 1:709166/1‑101 CTGAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA > 1:1480719/1‑101 GAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT < 2:183498/101‑1 GAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:135971/1‑101 GAACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:1191759/1‑101 ACGCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA < 1:1167533/101‑1 GCTTTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 1:1128408/101‑1 TTGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCT < 1:532696/101‑1 TGGCCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT > 2:147459/1‑101 CCCGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA > 2:280789/1‑101 CGTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAT > 1:504962/1‑101 GTCGCACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATT > 2:1670810/1‑101 ccCATGGCGTTTTGTACTGCACCAAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAG < 2:706837/99‑1 ACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG > 2:309562/1‑101 ACATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG < 2:1311449/101‑1 CATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGC > 2:1669528/1‑101 ATGGCGTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCT > 1:881924/1‑101 GCTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 14/27432‑27531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCT < 222/1442‑1352 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |