New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 14 27528 =2 (0.030)85 (1.280) 67/200 0.1 98.8% intergenic (–/–) –/– –/–
?222 1 = 0 (0.000)intergenic (–/–) –/– –/–

ATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  14/27627‑27528
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT  >  222/1‑95
                                                                                                                                                                                                   
ATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAT                                                                                                >  1:1664816/1‑101
ATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAT                                                                                                <  2:1518607/101‑1
ATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAT                                                                                                <  2:1368252/101‑1
 TTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATG                                                                                               >  2:552321/1‑101
  TTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGT                                                                                              <  2:1444705/101‑1
   TTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTA                                                                                             <  2:1629575/101‑1
   TTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTA                                                                                             >  1:1441089/1‑101
    TTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTAC                                                                                            <  2:1285886/101‑1
    TTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTAC                                                                                            <  1:1686325/101‑1
     TAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACT                                                                                           >  2:814527/1‑101
        CCGGCAAAAATCGGCAACATTAAATACAGCTTAATCAGCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCA                                                                                        >  1:811412/1‑101
         CGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGTATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCAC                                                                                       >  2:996869/1‑101
         CGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCAC                                                                                       <  2:150444/101‑1
           GCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCC                                                                                     >  2:1015300/1‑101
             AAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCAT                                                                                   >  1:1462987/1‑101
                 ATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTG                                                                               <  2:868851/101‑1
                    GGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTG                                                                            <  1:1148646/101‑1
                     GCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGG                                                                           <  1:649185/101‑1
                        ACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACG                                                                        <  2:297223/101‑1
                         CATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGA                                                                       >  2:1358203/1‑101
                           TTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATG                                                                     <  1:896465/101‑1
                               ATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                 <  2:785507/101‑1
                               ATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                 <  2:472576/101‑1
                                 ACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGG                                                               <  1:1015305/101‑1
                                 ACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGG                                                               >  2:592831/1‑101
                                   AGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAA                                                             >  1:788479/1‑101
                                     CTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                           <  2:667877/101‑1
                                      TTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                          >  1:1109538/1‑101
                                       TAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGAACCCATTTTGTTGGACGATGAAATGGAATAGC                                                         >  2:950304/1‑101
                                          TCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                      >  2:415576/1‑101
                                           CACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT                                                     <  2:1193567/101‑1
                                           CACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT                                                     <  2:252117/101‑1
                                              CAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                  <  1:1285310/101‑1
                                              CAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                  <  2:691044/101‑1
                                              CAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                  <  1:214711/101‑1
                                               AGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA                                                 <  1:1027388/101‑1
                                                GCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                <  1:1188271/101‑1
                                                GCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                <  1:592836/101‑1
                                                GCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                <  1:24613/101‑1
                                                 CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG                                               <  2:1408314/101‑1
                                                 CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG                                               <  1:1063078/101‑1
                                                   CATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC                                             <  2:912554/101‑1
                                                    ATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                                            <  1:394602/101‑1
                                                    ATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                                            <  2:26055/101‑1
                                                    ATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                                            >  1:618805/1‑101
                                                     TTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                           >  1:411475/1‑101
                                                     TTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                           >  2:238280/1‑101
                                                          GATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCA                                      >  1:1080090/1‑101
                                                          GATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCA                                      >  2:1155092/1‑101
                                                           ATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                                     <  1:786923/101‑1
                                                             ATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA                                   >  2:1627624/1‑101
                                                              TCGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                  <  1:814981/101‑1
                                                               CGATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA                                 >  2:1255703/1‑101
                                                                GATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC                                <  1:996874/101‑1
                                                                 ATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACC                               <  2:388736/101‑1
                                                                 ATAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACC                               <  2:508797/101‑1
                                                                  TAAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC                              >  2:375279/1‑101
                                                                   AAAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT                             <  2:869213/101‑1
                                                                    AAGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTT                            >  1:1073391/1‑101
                                                                     AGAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATCTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT                           >  2:292523/1‑101
                                                                      GAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT                          >  2:1414858/1‑101
                                                                      GAACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT                          <  2:1441083/101‑1
                                                                       AACGCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                         <  1:87917/101‑1
                                                                          GCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA                      <  2:1693682/101‑1
                                                                          GCACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA                      >  1:1300978/1‑101
                                                                            ACCGACCATCGGCACCACCAAAAATGTACTGCGCCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG                    <  2:765061/101‑1
                                                                            ACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG                    <  1:720061/101‑1
                                                                            ACCGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG                    >  1:217896/1‑101
                                                                              CGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCG                  >  1:1051578/1‑101
                                                                              CGACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCG                  <  1:1358209/101‑1
                                                                               GACCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGACAAAATACCCTTTTGAAAAGCGC                 >  1:232676/1‑101
                                                                                 CCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT               >  2:923495/1‑101
                                                                                 CCATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT               >  2:153265/1‑101
                                                                                  CATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTT              >  1:210262/1‑101
                                                                                  CATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTT              >  1:399984/1‑101
                                                                                   ATCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTG             >  2:1349113/1‑101
                                                                                    TCGGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGA            >  2:772424/1‑101
                                                                                      GGCACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTAAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAa          >  1:851840/1‑100
                                                                                        CACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTC        <  2:31498/101‑1
                                                                                         ACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCt       >  2:927479/1‑100
                                                                                         ACCACCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCG       >  2:1255655/1‑101
                                                                                            ACCAAAAATGTCCTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCGTTTTGAAAAGCGCCTTGAAGTCGTGA    >  2:1325525/1‑101
                                                                                             CCAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA   <  1:1325531/101‑1
                                                                                              CAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT  <  1:1043915/101‑1
                                                                                              CAAAAATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT  <  1:1164842/101‑1
                                                                                                                                                                                                   
ATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  14/27627‑27528
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT  >  222/1‑95

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.