New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	133	= 13039	0 (0.000)	53 (0.960)	24/166	1.2	92.2%	intergenic (–/–)	–/–	–/–
	?	160	= 29	9 (0.160)					intergenic (–/–)	–/–	–/–

ATCAGCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  133/12923‑13039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctttccattcaaacgtGAAATCAATAAGTTCATCAGGGACATCGC‑‑‑  <  160/29‑1                                                                                                                                                       ATCAGCAGAACTGATATAATATCTGACCGTCAATTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCC                                                  >  1:21579/1‑101   CAGCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCT                                                <  2:910933/101‑1    aaCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTT                                               >  2:1672189/3‑101    AGCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTT                                               >  2:263815/1‑101    AGCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTT                                               <  1:687933/101‑1     GCAGAACTGATATAATATCTGACCGTCATTTCTGGTTCTTTCTTTTGTTCTGCTATTATGGTCCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTT                                              <  1:1249052/101‑1       AGAACTGATATAATATCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCC                                            >  1:880110/1‑101       AGAACTGATATAATATCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCC                                            >  2:280066/1‑101       AGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTTTTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCC                                            >  2:1488342/1‑101       AGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCC                                            >  2:156720/1‑101       AGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCC                                            >  2:1699389/1‑101       AGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCC                                            <  2:354401/101‑1                              TCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGT                     >  2:1707680/1‑101                              TCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGT                     <  1:389693/101‑1                              TCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGT                     >  2:641350/1‑101                              TCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGT                     <  1:341755/101‑1                               CATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTT                    >  1:631419/1‑101                                ATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTC                   <  1:10767/101‑1                                ATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTC                   >  2:1642582/1‑101                                ATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTC                   <  2:1399269/101‑1                                ATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTC                   <  2:1298802/101‑1                                ATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGAATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTC                   >  2:1513005/1‑101                                 TTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCA                  <  2:499791/101‑1                                 TTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCA                  <  1:74826/101‑1                                 TTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCA                  <  1:912694/101‑1                                  TTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCAT                 <  2:1154204/101‑1                                  TTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCAT                 >  1:1320182/1‑101                                  TTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCAT                 >  2:1054640/1‑101                                   TCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATC                >  2:14935/1‑101                                   TCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATC                <  1:1663924/101‑1                                   TCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATC                <  1:1601490/101‑1                                   TCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATC                <  2:1180817/101‑1                                    CTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCA               <  2:938769/101‑1                                     tgtCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAG              <  1:30305/98‑1                                     tgtCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAG              <  2:727543/98‑1                                     TGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGAATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAG              <  1:1513011/101‑1                                      gtCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGG             >  2:1131843/3‑101                                       tCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGG            <  2:464459/100‑1                                       tCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGG            >  1:45354/2‑101                                       GCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGG            >  1:1594209/1‑101                                       GCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGG            >  1:538777/1‑101                                       GCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGG            >  1:590973/1‑101                                       GCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTAAAACGTGAAATCAATAAGTTCATCAGGG            >  1:1441813/1‑101                                        CTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGA           >  1:1385114/1‑101                                        CTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGA           >  2:391074/1‑101                                        CTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGA           <  2:1144678/101‑1                                         TCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGAC          <  2:347189/101‑1                                         TCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAGCGTGAAATCAATAAGTTCATCAGGGAC          <  1:1321631/101‑1                                         TCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGAC          <  2:1196843/101‑1                                          CTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACA         >  1:722878/1‑101                                          CTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACA         <  1:656627/101‑1                                          CTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCATTAAGTTCATCAGGGACA         >  1:1120431/1‑101                                          CTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACA         >  1:686324/1‑101                                          CTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACA         >  2:674891/1‑101                                           TTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACAT        >  1:201165/1‑101                                            TTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATC       <  2:723338/101‑1                                            TTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATC       <  1:1093533/101‑1                                             nCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCG      >  1:593269/2‑101                                             TCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCG      <  1:1682383/101‑1                                              CTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGC     >  1:950382/1‑101                                              CTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCGC     >  2:1272294/1‑101                                              CTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCGC     >  1:691682/1‑101                                              CTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCGC     >  1:1279997/1‑101                                                TTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTTAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCGCaa   >  2:171454/1‑99                                                 TTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGTGAAATCAATAAGTTCATCAGGGACATCGCaaa  <  2:628345/101‑4                                                                                                                                                       ATCAGCAGAACTGATATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  133/12923‑13039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctttccattcaaacgtGAAATCAATAAGTTCATCAGGGACATCGC‑‑‑  <  160/29‑1

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.