| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 133 | = 13036 | 0 (0.000) | 53 (0.800) +T |
27/198 | 1.6 | 64.5% | intergenic (–/–) | –/– | –/– |
| ? | 87 | 19464 = | 59 (0.890) | intergenic (–/–) | –/– | –/– | |||||
TATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 133/12937‑13036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAAATCAATAAGCTCATCAGGGACATCGCAAACAATATGAAGACGGGTTTCTTCTCTGC‑‑‑‑‑‑‑‑‑‑ > 87/19464‑19524 | TATAATATCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAAT > 1:305946/1‑101 ATCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAA > 1:625667/1‑101 ATCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAA < 1:1267711/101‑1 TCTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAAT < 2:450518/101‑1 CTGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATC < 2:490882/101‑1 tgcCCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCA < 2:1388970/98‑1 TGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCA < 2:168364/101‑1 TGACCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCA < 1:1505246/101‑1 CCGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATA < 1:68976/101‑1 CGTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAA < 2:422908/101‑1 GTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCNNNNNTAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAG > 1:1588897/1‑101 GTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGTAATCAATAAG > 1:381949/1‑101 GTCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAG < 2:584485/101‑1 TCATTTCTGTCTCTTTCTTTTGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGt < 2:1574826/101‑2 TGTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAAC < 1:511800/101‑1 GTTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACA > 1:1007001/1‑101 TTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAA > 1:967183/1‑101 TTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAA > 2:1326004/1‑101 TTCTGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAA > 1:1097232/1‑101 TGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATgt < 1:1576187/101‑3 TGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATgt < 2:117965/101‑3 TGCTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATgt < 1:6125/101‑3 CTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGA > 1:114246/1‑101 CTATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGA > 2:66369/1‑101 TATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAA > 2:1645022/1‑101 ATTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAG > 1:374189/1‑101 TTATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGA > 1:965026/1‑101 TATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGAC > 1:107714/1‑101 TATTGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGAC < 1:5948/101‑1 attGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACG < 2:1305336/98‑1 CCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTT < 2:1486429/101‑1 CCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTT < 2:39195/101‑1 GAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCT > 2:629765/1‑101 AGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCT > 2:1150829/1‑101 AGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCT > 1:457247/1‑101 AGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGAGAAGAAGGATTTCTTat > 2:1641390/1‑99 GAGGCTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTGATCAGGGACATCGCGAACAATGTCAAGACGGATTTCTTCTCc < 2:1339081/101‑2 GAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCT < 2:950773/101‑1 nGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTG > 1:861138/2‑101 AGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTG > 1:1275765/1‑101 AGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTG < 1:241329/101‑1 GACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGC > 2:1650876/1‑101 ACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCc < 2:79660/101‑2 TGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgt > 1:422316/1‑98 TGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgt > 2:364635/1‑98 TGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgt > 2:293309/1‑98 TGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgt > 1:1032233/1‑98 GCCACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtg < 2:305946/101‑5 CACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgac > 2:1238466/1‑95 ACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgact > 1:1201447/1‑94 ACGCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgact > 1:1435330/1‑94 GCATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgactct > 1:1241548/1‑92 CATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgactctt > 1:518901/1‑91 CATAATTTCTTCAGCCCTTTCCATTCAAATGTGAAATCAATAAGTTCATCAGGGACATCGCAAACAATGTGAAGACGGATTTCTTCTCTGCcgtgactctt < 1:1564453/101‑11 | TATAATATCTGACCGTCATTTCTGGCTCTTTCTTTTGTTCTGCTATTATGGACCGAAAGGAGACTGCCACGCATAATTTCTTCAGCCCTTTCCATTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 133/12937‑13036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAAATCAATAAGCTCATCAGGGACATCGCAAACAATATGAAGACGGGTTTCTTCTCTGC‑‑‑‑‑‑‑‑‑‑ > 87/19464‑19524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |