| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 127 | 1 = | 0 (0.000) | 46 (0.930) +TACCGGAGTTTGACGGTGCCAACGGC |
39/148 | 0.2 | 70.9% | intergenic (–/–) | –/– | –/– |
| ? | 97 | = 16972 | 51 (0.770) | intergenic (–/–) | –/– | –/– | |||||
TACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 127/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAAACCGAC < 97/16972‑16879 ||||||||||||||||||||||||||| TACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTA < 1:647659/101‑1TACGGGTGTACCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTA < 2:923055/101‑1 TGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGcg > 2:1567841/1‑99 TGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAG > 1:722081/1‑101 GTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGT > 1:1348392/1‑101 TCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTT > 1:406032/1‑101 TCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTT < 1:5674/101‑1 GCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGG < 2:1130098/101‑1 CAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCC > 2:1387872/1‑101 CGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAAC > 2:873127/1‑101 GATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑G > 1:1417292/1‑101 TAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGG > 1:1213275/1‑101 TAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGG < 1:973251/101‑1 AAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGT < 1:16267/101‑1 ACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGT < 1:1693702/101‑1 CCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGgggt > 2:1475179/1‑97 CGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGgggtc > 2:1491940/1‑96 CTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCC < 1:1192935/101‑1 TCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCG < 1:1387878/101‑1 CTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTTCCCGCGC > 1:182666/1‑101 TGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCC < 1:1664236/101‑1 GTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTTCCCGCGCCc > 2:1561050/1‑100 TAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAG > 2:1061869/1‑101 AATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCCGCG > 1:1129657/1‑101 CCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTGCCCGCGCCACCGGGGA > 2:762439/1‑101 AAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAA < 1:585334/101‑1 AAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAGCGGGGATAA > 2:833154/1‑101 ATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCACACGGGGTTAACCGAC > 1:886966/1‑101 TCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGTGTTTGACGGTGCCAACGGC‑GGGGGGTGCCCCCCCCGGCCGGGATAAACCGGCA > 2:1558329/1‑101 TCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACA < 2:191567/101‑1 TCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACA < 2:1417286/101‑1 TCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACA < 2:576542/101‑1 CTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTTCCCCCGCCCGCGGGGGGAAACAGGCAA > 1:1597391/1‑101 CTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAA < 1:712415/101‑1 CTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAA < 2:406027/101‑1 CTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAGCCGGGGTAAACCGACAA > 2:1010232/1‑101 CTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTTCCCGCGCCAGCGGGGGTAAAACGACAATC > 2:595415/1‑101 TATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAGCGGGGGTAAACCGACAATCA > 1:1614623/1‑101 ATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAG < 2:529338/101‑1 TAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGGTCCCCGCGCCAGAGGGGGTAAAACGACAAACAGG > 2:316471/1‑101 TGTTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAA < 2:350582/101‑1 TTCCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACG < 1:833159/101‑1 CCCCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGAT < 1:1047397/101‑1 CCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTG < 1:1301932/101‑1 CCGCGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTG < 1:1061874/101‑1 CGCCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTG < 1:424035/101‑1 CCAGCGTGGATAAACCTACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGAC < 2:1184109/101‑1 CCAGCGGGGATAAACCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGGTCCCCGCGCCAGCGGGGGTAAACCGACAATCAGGGAACGATTGTTGAC > 1:1493652/1‑101 AACCGACAGTACCGGAGTTTGACGGTGCCAACGGCGGGGGGTTCCCCG‑GCCACCGGGGATAAACCGACAAACAGGGAAAGATTGTTGACACTGTAAAAATG > 1:724956/1‑101 CCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTT < 2:816549/101‑1 CCGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTT < 1:498524/101‑1 CGACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTC < 1:233081/101‑1 GACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCC < 1:377755/101‑1 ACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCC < 2:246178/101‑1 ACAGTACCGGAGTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCC < 2:1381395/101‑1 GTACCGGAGTTTGACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTTCCCGT > 1:1202544/1‑101 gcttcctcTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTG > 2:1000516/9‑101 GTTTGACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGG < 1:762444/101‑1 GACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGAT > 1:544177/1‑101 GACGGTGCCAACGGC‑GGGGGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGgt > 2:1185288/1‑99 ACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATA > 2:1340312/1‑101 ACGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATA < 1:1014881/101‑1 CGGTGCCAACGGC‑GGGTGTTTCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAA > 2:691331/1‑101 CGGTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAA < 1:1561056/101‑1 GTGCCAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAAAC < 1:266090/101‑1 CAACGGC‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAAACCGAC < 1:877488/101‑1 ||||||||||||||||||||||||||| TACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 127/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCGTGCTAGCGGGGATAAACCGAC < 97/16972‑16879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |