New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 12 = 445205 (0.080)74 (1.110) 57/200 0.2 96.7% intergenic (–/–) –/– –/–
?222 1 = 0 (0.000)intergenic (–/–) –/– –/–

TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  12/44422‑44520
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  >  222/1‑97
                                                                                                                                                                                                    
TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTG                                                                                                 >  2:594993/1‑101
TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTG                                                                                                 <  1:171929/101‑1
 AAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGT                                                                                                <  2:1496812/101‑1
    GCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACT                                                                                             >  1:732579/1‑101
    GCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACT                                                                                             <  1:248791/101‑1
      ACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGC                                                                                           <  1:1146456/101‑1
         TTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACC                                                                                        >  1:805294/1‑101
          TCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCC                                                                                       >  2:1447539/1‑101
             CTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATT                                                                                    <  2:797324/101‑1
              TGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTT                                                                                   >  2:1410790/1‑101
               GTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTT                                                                                  >  2:53128/1‑101
                   CAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTG                                                                              >  1:1296964/1‑101
                   CAACTTAGCCCTGACTGGACGAGAAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCCCCCATTTTGTTG                                                                              <  1:310931/101‑1
                      CTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGAC                                                                           >  1:867707/1‑101
                         AGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGAT                                                                        >  1:1483924/1‑101
                            CCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAA                                                                     <  1:180723/101‑1
                            CCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAA                                                                     <  2:732574/101‑1
                              TGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                   <  2:573294/101‑1
                              TGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                   <  2:1020248/101‑1
                               GACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATG                                                                  <  2:1483918/101‑1
                               GACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGCGGGGATCCCGGATCTGCAACCAGAAACTGAACTGCACCCATTTTGTCGGACGCTGAAATG                                                                  >  2:1142652/1‑101
                                ACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGG                                                                 <  1:1583336/101‑1
                                ACTGGACGAGCAATTCCTGCCGCGGCGCATGTAAGGTTGTGGGTAGCCCGGAACTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGG                                                                 >  2:459547/1‑101
                                 CTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATCGA                                                                >  2:1551702/1‑101
                                  TGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA                                                               <  1:594998/101‑1
                                   GGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT                                                              <  1:53128/101‑1
                                   GGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT                                                              <  2:285165/101‑1
                                     ACGAGCAGTTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                            <  2:1562106/101‑1
                                      CGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC                                                           >  1:1640412/1‑101
                                      CGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC                                                           >  1:1248790/1‑101
                                         GCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                        <  1:1071538/101‑1
                                         GCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                        >  1:234287/1‑101
                                           AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA                                                      >  2:1151927/1‑101
                                           AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA                                                      >  1:38473/1‑101
                                           AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA                                                      <  1:607154/101‑1
                                            ATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA                                                     >  2:547627/1‑101
                                            ATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA                                                     >  2:1047480/1‑101
                                             TTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                    <  2:535674/101‑1
                                             TTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                    <  2:830297/101‑1
                                               CCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                  <  2:327654/101‑1
                                               CCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                  <  2:1565526/101‑1
                                                 TGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGT                                                <  1:1410796/101‑1
                                                     GTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA                                            <  1:755372/101‑1
                                                      TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG                                           <  1:1443958/101‑1
                                                      TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG                                           <  2:20915/101‑1
                                                      TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG                                           <  2:149771/101‑1
                                                           CATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAA                                      <  2:261307/101‑1
                                                            ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA                                     >  1:1474728/1‑101
                                                            ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA                                     >  1:271057/1‑101
                                                            ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA                                     >  1:1208768/1‑101
                                                             TGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGCTGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                    >  2:1458712/1‑101
                                                              GTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA                                   <  2:1540874/101‑1
                                                              GTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA                                   >  2:912289/1‑101
                                                               TAAGCTTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTTCACCCATTTTGTTGGACGATGAGATGTAATAGAGCCTAATATGTCAACGCCACAATAC                                  >  2:98883/1‑101
                                                                 AGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC                                <  2:905970/101‑1
                                                                  GATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT                               <  1:547632/101‑1
                                                                    TTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT                             <  2:7323/101‑1
                                                                    TTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT                             <  2:1001712/101‑1
                                                                     TGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT                            >  2:1687243/1‑101
                                                                      GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                           <  1:1014995/101‑1
                                                                      GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                           >  1:1650665/1‑101
                                                                      GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                           >  2:1352631/1‑101
                                                                      GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                           >  1:411992/1‑101
                                                                        GGGTAGCCAGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGAAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA                         <  2:1297819/101‑1
                                                                          GTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA                       <  1:1001804/101‑1
                                                                          GTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA                       <  2:848807/101‑1
                                                                            AGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC                     >  1:55437/1‑101
                                                                                CGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT                 >  2:218731/1‑101
                                                                                 GGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTT                <  1:864780/101‑1
                                                                                     CTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG            >  2:1608480/1‑101
                                                                                            CAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA     <  2:1474722/101‑1
                                                                                            CAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA     <  2:867702/101‑1
                                                                                             AGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT    <  2:271057/101‑1
                                                                                               AAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  >  1:1021342/1‑101
                                                                                                                                                                                                    
TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  12/44422‑44520
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  >  222/1‑97

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.