New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 12 | = 44520 | 5 (0.080) | 74 (1.110) | 57/200 | 0.2 | 96.7% | intergenic (–/–) | –/– | –/– |
? | 222 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 12/44422‑44520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 222/1‑97 TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTG > 2:594993/1‑101 TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTG < 1:171929/101‑1 AAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGT < 2:1496812/101‑1 GCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACT > 1:732579/1‑101 GCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACT < 1:248791/101‑1 ACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGC < 1:1146456/101‑1 TTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACC > 1:805294/1‑101 TCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCC > 2:1447539/1‑101 CTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATT < 2:797324/101‑1 TGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTT > 2:1410790/1‑101 GTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTT > 2:53128/1‑101 CAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTG > 1:1296964/1‑101 CAACTTAGCCCTGACTGGACGAGAAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCCCCCATTTTGTTG < 1:310931/101‑1 CTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGAC > 1:867707/1‑101 AGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGAT > 1:1483924/1‑101 CCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAA < 1:180723/101‑1 CCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAA < 2:732574/101‑1 TGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAAT < 2:573294/101‑1 TGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAAT < 2:1020248/101‑1 GACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATG < 2:1483918/101‑1 GACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGCGGGGATCCCGGATCTGCAACCAGAAACTGAACTGCACCCATTTTGTCGGACGCTGAAATG > 2:1142652/1‑101 ACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:1583336/101‑1 ACTGGACGAGCAATTCCTGCCGCGGCGCATGTAAGGTTGTGGGTAGCCCGGAACTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 2:459547/1‑101 CTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATCGA > 2:1551702/1‑101 TGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:594998/101‑1 GGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:53128/101‑1 GGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 2:285165/101‑1 ACGAGCAGTTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 2:1562106/101‑1 CGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:1640412/1‑101 CGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:1248790/1‑101 GCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:1071538/101‑1 GCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC > 1:234287/1‑101 AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 2:1151927/1‑101 AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 1:38473/1‑101 AATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:607154/101‑1 ATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 2:547627/1‑101 ATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 2:1047480/1‑101 TTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 2:535674/101‑1 TTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 2:830297/101‑1 CCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 2:327654/101‑1 CCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 2:1565526/101‑1 TGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGT < 1:1410796/101‑1 GTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA < 1:755372/101‑1 TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG < 1:1443958/101‑1 TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG < 2:20915/101‑1 TGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG < 2:149771/101‑1 CATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAA < 2:261307/101‑1 ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA > 1:1474728/1‑101 ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA > 1:271057/1‑101 ATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA > 1:1208768/1‑101 TGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGCTGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT > 2:1458712/1‑101 GTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA < 2:1540874/101‑1 GTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA > 2:912289/1‑101 TAAGCTTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTTCACCCATTTTGTTGGACGATGAGATGTAATAGAGCCTAATATGTCAACGCCACAATAC > 2:98883/1‑101 AGATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC < 2:905970/101‑1 GATTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT < 1:547632/101‑1 TTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT < 2:7323/101‑1 TTGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT < 2:1001712/101‑1 TGTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT > 2:1687243/1‑101 GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG < 1:1014995/101‑1 GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > 1:1650665/1‑101 GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > 2:1352631/1‑101 GTGGGTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > 1:411992/1‑101 GGGTAGCCAGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGAAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA < 2:1297819/101‑1 GTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA < 1:1001804/101‑1 GTAGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA < 2:848807/101‑1 AGCCCGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC > 1:55437/1‑101 CGGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT > 2:218731/1‑101 GGATCTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTT < 1:864780/101‑1 CTGAAACCAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG > 2:1608480/1‑101 CAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA < 2:1474722/101‑1 CAGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA < 2:867702/101‑1 AGAAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT < 2:271057/101‑1 AAACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 1:1021342/1‑101 TAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 12/44422‑44520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 222/1‑97 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |