New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 12 | 44517 = | 9 (0.140) | 67 (1.020) | 60/198 | 0.1 | 93.8% | intergenic (–/–) | –/– | –/– |
? | 222 | = 1442 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TTTCACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 12/44617‑44517 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT < 222/1442‑1348 TTTCACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTT > 2:1305703/1‑101 TTCACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTG > 2:282254/1‑101 CACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTA > 1:1179833/1‑101 ACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTAC < 2:422841/101‑1 ATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTG > 2:267298/1‑101 TTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCC > 2:1239610/1‑101 TACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCC < 2:1072152/101‑1 CGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAA > 1:519143/1‑101 GAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAA > 1:1293503/1‑101 GGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGG < 1:1194570/101‑1 GGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGG > 2:282400/1‑101 GTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGA > 2:179156/1‑101 ACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAGAAAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACA > 1:158379/1‑101 ACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAG < 2:1179828/101‑1 CTGGATTCCACCCCTTCCAGCCAGCCTTCTTCCCCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTA < 1:482983/101‑1 CTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:12411/1‑101 GATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 2:971622/101‑1 AACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG < 2:1145304/101‑1 CCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA < 1:1124391/101‑1 CCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:963893/1‑101 CTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA > 2:178359/1‑101 TCCAGACAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA > 1:1014048/1‑101 CCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 2:704855/1‑101 CCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:1078488/1‑101 CAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:351030/1‑101 GCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC > 1:432468/1‑101 CCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:1158704/101‑1 CCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT > 2:175522/1‑101 CAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 2:224882/101‑1 AGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 2:1328075/1‑101 GCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT < 1:755953/101‑1 TTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC > 2:1660230/1‑101 TTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT > 2:1447525/1‑101 ACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATT > 1:1093278/1‑101 ACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATT > 1:114827/1‑101 CCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTC < 2:604565/101‑1 ATGTAG‑TAAAGCCCCATCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT > 2:1155986/1‑101 ATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT < 2:508263/101‑1 ATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT > 2:1422354/1‑101 TGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT < 1:1521276/101‑1 GTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTG > 1:1225512/1‑101 TAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG < 2:1303329/101‑1 G‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG < 1:593687/101‑1 G‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG > 2:1321948/1‑101 TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:411442/1‑101 TAAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:950626/1‑101 AAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTC > 1:1601268/1‑101 AAAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTC < 1:414747/101‑1 AAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA < 1:1656405/101‑1 AAGCCCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 2:1206667/1‑101 CCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACC > 1:341820/1‑101 CCCAGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACC > 2:1463459/1‑101 AGCTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTT > 1:1072958/1‑101 CTCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA < 1:1411387/101‑1 TCCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAA > 2:789908/1‑101 CCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAT > 2:1693101/1‑101 CCCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAT > 2:531347/1‑101 CCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATT < 2:1308914/101‑1 CCAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATT > 1:1192542/1‑101 CAACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTT > 1:276880/1‑101 ACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCA < 1:282400/101‑1 ACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCA > 1:840787/1‑101 ACTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCA < 1:256238/101‑1 CTTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAG < 1:1321954/101‑1 TTTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG < 1:336698/101‑1 TTCGCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGC < 1:789913/101‑1 GCTGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAA > 1:1143378/1‑101 TGGTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT < 2:1078483/101‑1 TTTCACATCGTTACGGAAAACGGTAACGCTGGATTCAACCCCTTCCAGCCAGCCTTCTTCACCCATGTAG‑TAAAGCCCCAGCTCCCAACTTTCGCTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 12/44617‑44517 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT < 222/1442‑1348 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |