New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 115 | = 14429 | 0 (0.000) | 38 (0.660) | 28/172 | 1.4 | 76.8% | intergenic (–/–) | –/– | –/– |
? | 135 | 12618 = | 23 (0.400) | intergenic (–/–) | –/– | –/– |
ACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 115/14316‑14429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTG‑‑‑‑‑‑‑ > 135/12618‑12670 ACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAG < 2:861243/101‑1 CTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTG > 1:192505/1‑101 TCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGG < 1:1647363/101‑1 TCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGG < 2:661022/101‑1 GAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATA < 1:1094209/101‑1 TGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGAC < 2:1350997/101‑1 TGGACGATTTGGGGAAACCGTATCCGTAGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGAC < 2:488103/101‑1 GACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC < 1:211752/101‑1 GATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCC > 2:955651/1‑101 ATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCTCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCA < 1:1561225/101‑1 TTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAG > 2:1059223/1‑101 TTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGC > 1:185960/1‑101 GGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGT < 1:633822/101‑1 GGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCG > 1:1719799/1‑101 AAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCA < 1:214487/101‑1 AACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCAT > 1:402923/1‑101 AACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCAT > 2:709302/1‑101 GTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGG > 1:1663887/1‑101 GTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGG > 1:150583/1‑101 TATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGC > 2:799889/1‑101 TATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGC > 1:895907/1‑101 ATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCA < 2:788689/101‑1 TCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCAT < 1:937968/101‑1 CCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATT > 2:1346725/1‑101 GCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTT > 2:1004253/1‑101 CTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTC > 1:866215/1‑101 TGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCT < 2:915655/101‑1 TGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCT < 1:1206863/101‑1 GAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTG < 2:574450/101‑1 GAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTG < 1:1703246/101‑1 AATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGC > 2:1709634/1‑101 ATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCG < 1:1335435/101‑1 GTATGCGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCTAATGa > 2:397924/1‑100 TGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAA < 1:667517/101‑1 TGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAA < 2:1357901/101‑1 GGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGG < 2:192505/101‑1 GGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGC > 2:801460/1‑101 GAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCA > 1:1641148/1‑101 GAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCA < 1:1347603/101‑1 ATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCCCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATC > 1:229663/1‑101 AAGCCGCTCCCTGTCGTGCTATCGTGCCTGCGTCAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCT < 2:379300/101‑1 AAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCT < 1:984145/101‑1 AGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTG < 2:701799/101‑1 CCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGac < 1:1613527/101‑3 CCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGac < 1:799894/101‑3 CCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggctg > 2:50146/1‑94 ACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 115/14316‑14429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTG‑‑‑‑‑‑‑ > 135/12618‑12670 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |