| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 111 | = 9632 | 90 (1.350) | 32 (0.480) | 22/200 | 2.5 | 41.6% | intergenic (–/–) | –/– | –/– |
| ? | 176 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
ACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 111/9552‑9632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATG > 176/1‑99 ACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATA > 2:41114/1‑101ACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATA < 1:1285918/101‑1 aagtgttCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGC < 2:1569772/94‑1 gtgttCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGT < 2:772358/96‑1 ttCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGC < 1:103613/99‑1 tCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCG > 1:932989/2‑101 GTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCA > 1:1701033/1‑101 gttttTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCA > 1:33915/6‑101 tTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCA < 1:543580/100‑1 GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAT < 1:193486/101‑1 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATT < 2:1437003/101‑1 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATT < 1:666328/101‑1 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATT > 1:1092723/1‑101 CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTC > 1:1180735/1‑101 CGGCGGGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTT > 2:1714590/1‑101 GTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTC > 1:589446/1‑101 ACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATAC < 1:1246497/101‑1 ACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATAC < 2:80001/101‑1 GCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGT > 1:1557421/1‑101 TCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAA < 2:816004/101‑1 CCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAG < 1:597973/101‑1 CCGGCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAG < 2:1056471/101‑1 GCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGC > 1:1068627/1‑101 GCCTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGC < 2:1052959/101‑1 CTACAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGA > 2:1438212/1‑101 CAAAATCGCTTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCT < 2:1186422/101‑1 aaatcgctTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTG > 1:815824/9‑101 atcgctTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCG > 1:640640/7‑101 tTAAATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGC > 2:1190582/2‑101 AATTCAATATATTGCACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCT < 2:1122947/101‑1 CACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATG > 2:584821/1‑101 CACCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATG > 2:243939/1‑101 ACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 111/9552‑9632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATG > 176/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |