New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 101 | = 16326 | 0 (0.000) | 64 (1.140) | 46/168 | 0.0 | 76.6% | intergenic (–/–) | –/– | –/– |
? | 178 | = 5270 | 39 (0.700) | intergenic (–/–) | –/– | –/– |
AATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 101/16212‑16326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcttacccagcaaTAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCC < 178/5270‑5172 AATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTG > 2:410972/1‑101 ATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGCAAACTGA > 2:462918/1‑101 ATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGA > 2:70250/1‑101 ATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGA > 2:599316/1‑101 TTTCAACGGCCTGTTTAATTTCGTCCGCCGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGAT < 2:290530/101‑1 TCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCT < 1:1524037/101‑1 TCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGGGAGGGGGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCT > 2:1385232/1‑101 AACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTA > 1:323216/1‑101 GGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCC > 2:920767/1‑101 CTGTTTAATTTCGTCCGCGGTTAGCGCGTTAAGTGGGTGACGGCGCTTTTCTACCTGAAAGGCTTGATCCAGCCCGGACTGGAAAACTGATCTTACGCAGC > 2:558918/1‑101 CTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGC > 1:707695/1‑101 CTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGC > 1:1234682/1‑101 TGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCA < 2:1602822/101‑1 TAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCTCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAG < 2:1642544/101‑1 TAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAG < 2:200070/101‑1 ATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTG > 2:596589/1‑101 ATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTG > 1:712568/1‑101 ATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTG < 2:1362846/101‑1 ATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTG > 1:1234580/1‑101 TTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGA < 1:1467311/101‑1 GTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACAC < 2:347311/101‑1 TCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCGTTTCTATCTGAAAGGTTTGATCCAGCCCGGACTGGGAAACTGATCTTACGCAGCAATAGTGGAGACG > 2:482137/1‑101 CAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGC < 1:202388/101‑1 GTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTA > 1:291604/1‑101 TAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAG < 1:590579/101‑1 CGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGA < 2:956949/101‑1 CGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGA < 2:1645661/101‑1 GCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAG < 2:1234575/101‑1 GCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAG < 2:808509/101‑1 GCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAG < 2:1030035/101‑1 AGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACT < 1:1649552/101‑1 GTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTC > 2:1256588/1‑101 GTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTC > 2:1283850/1‑101 TGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCT < 2:1025242/101‑1 TGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCT < 1:920772/101‑1 TGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCT < 2:295808/101‑1 GGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTC < 2:776650/101‑1 GTGAGGGCGCTTTTCTGCCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAG < 1:943323/101‑1 GTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAG < 1:841786/101‑1 TGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGT > 1:585852/1‑101 TGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGT > 1:116638/1‑101 TGAGGGCGCTTGTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACGGATCTTACCCAGTAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGT < 2:1006109/101‑1 GGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGA > 2:1089357/1‑101 GCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGT > 2:984048/1‑101 TTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAC > 2:230434/1‑101 TTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACT > 2:1640965/1‑101 TTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACT < 2:1157291/101‑1 TTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACT < 2:1442334/101‑1 TACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCAC > 2:1486207/1‑101 CCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACAT < 1:599321/101‑1 CCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACAT > 2:1146579/1‑101 CTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATG > 1:1571986/1‑101 CTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATG > 1:1444053/1‑101 GAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAC > 2:1398322/1‑101 GAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAC < 2:116638/101‑1 GAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAC > 2:98264/1‑101 AAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACA > 1:1462383/1‑101 AGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAA < 1:69140/101‑1 GTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA > 2:1230343/1‑101 TGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAG < 1:1256593/101‑1 TGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAG < 2:291604/101‑1 ATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTA < 2:724297/101‑1 tcaAGCCCGGCCTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAT < 1:462923/98‑1 TCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAT < 2:427346/101‑1 TCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAT < 1:151507/101‑1 CAGCCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCA < 1:1337426/101‑1 CAGCCCGGACTGGAAAACTGATATTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCA > 1:1029446/1‑101 CCCGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACC > 2:1651574/1‑101 CGGACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAG < 2:1234677/101‑1 ACTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAA < 1:907355/101‑1 CTGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAA > 2:410360/1‑101 TGGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAA > 1:760600/1‑101 GGAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAA > 1:1311966/1‑101 GAAAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAA < 2:774377/101‑1 AAACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACC < 2:1579250/101‑1 ACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCC < 1:1640971/101‑1 ACTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCC < 1:1219255/101‑1 AATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCC < 1:677316/101‑1 AATTTCAACGGCCTGTTTAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 101/16212‑16326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcttacccagcaaTAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCC < 178/5270‑5172 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |