New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	10	17 =	49 (0.740)	36 (0.630)	16/172	2.9	63.1%	intergenic (–/–)	–/–	–/–
	?	54	15 =	0 (0.000)					intergenic (–/–)	–/–	–/–

GTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/128‑17 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCGC  >  54/15‑112                                                                                                                                                                                                                     GTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCG                                                                                                               >  2:775357/1‑101  TTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGG                                                                                                              >  1:1527737/1‑101     ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                           <  2:1123747/101‑1     ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                           >  1:580367/1‑101     ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                           <  1:528077/101‑1      TCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAA                                                                                                          >  2:1084790/1‑101      TCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAA                                                                                                          <  2:1110886/101‑1                          gcttGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                                                      <  1:1202580/97‑1                           cttGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                     >  1:1382808/4‑101                           cttGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                     >  2:1464671/4‑101                           cttGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                                     <  1:1333832/98‑1                               CCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATga                                                                                 <  1:431542/101‑3                                 TGATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATgaac                                                                               >  1:1047295/1‑97                                  GATGCGCGATGCTTATCAGGCCTACCAGAAGATT‑GCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATgaaca                                                                              <  1:639745/101‑6                                            gCTTATCAGGCCTACAAG‑GGATTCGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTT                                                                   >  1:724950/2‑101                                             CTTATCAGGCCTACAAG‑GGATTCGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTA                                                                  <  2:1030044/101‑1                                                ATCAGGCCTACAAG‑GGATTCGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACA                                                               <  1:532523/101‑1                                                 TCAGGCCTACAAG‑GGATTCGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAG                                                              <  1:1199007/101‑1                                                   AGGCCTACAAG‑GGATTCGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAT                                                            <  2:1110529/101‑1                                                           caagggattcGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTAT                                                     <  1:183250/91‑1                                                                    cGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCAC                                            >  1:1024023/2‑101                                                                    cGCAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCAC                                            >  2:355282/2‑101                                                                      CAATTTGTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACAC                                          >  1:284210/1‑101                                                                        atttgTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCA                                        >  2:585892/6‑101                                                                          ttgTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAG                                      <  2:14392/98‑1                                                                            gTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTC                                    <  1:1443944/100‑1                                                                            gTTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTC                                    <  1:922232/100‑1                                                                             TTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCC                                   >  1:1562533/1‑101                                                                             TTGAATTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCC                                   >  1:840258/1‑101                                                                                  TTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAG                              <  2:955596/101‑1                                                                                  TTTGCA‑GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAG                              <  1:877103/101‑1                                                                                      gcagaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCATGCGCACACCAAGTCCCGTAGCGC                           >  2:1457842/7‑101                                                                                         gaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCG                        >  1:1338612/4‑101                                                                                         gaaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCG                        >  1:1026832/4‑101                                                                                          aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGC                       >  2:328037/3‑101                                                                                           aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCA                      >  2:163107/2‑101                                                                                            TTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAG                     >  1:1453053/1‑101                                                                                              TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGAC                   >  1:770883/1‑101                                                                                              TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGAC                   >  2:1147622/1‑101                                                                                                 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAC                >  1:1513170/1‑101                                                                                                  GGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCTCCCGCAGACCACT               <  2:507626/101‑1                                                                                                  GGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACT               <  2:665243/101‑1                                                                                                  GGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACT               <  2:724945/101‑1                                                                                                    CCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGT             >  1:671649/1‑101                                                                                                     CGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTT            >  2:1171152/1‑101                                                                                                        ATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAA         >  2:1273083/1‑101                                                                                                         TAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAC        <  1:70809/101‑1                                                                                                           AGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCG      <  2:1285794/101‑1                                                                                                           AGGCGTTTACGCCGCATCCGGCATATTAGTGTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCG      <  2:1149678/101‑1                                                                                                              CGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCG   >  1:1003839/1‑101                                                                                                               GTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCGC  >  1:588301/1‑101                                                                                                                                                                                                                     GTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATT‑GCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/128‑17 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCGC  >  54/15‑112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.