New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 1 | 1 = | 0 (0.000) | 26 (0.480) +CCTACGGTTCGATGCGATT |
19/162 | 0.5 | 52.1% | intergenic (–/–) | –/– | –/– |
? | 51 | 15466 = | 59 (0.890) | intergenic (–/–) | –/– | –/– |
GAATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGC > 51/15466‑15513 ||||||||||||||||||| GAATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCC < 1:869736/101‑1 AATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCT < 2:253176/101‑1 ATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA < 1:1217433/101‑1 CAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGG > 1:1166716/1‑101 ACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGA > 2:318774/1‑101 CGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCG < 2:344897/101‑1 GTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAAGGCTTTTTCGGGCCACCGGTTCAATGGGATTT > 2:1094214/1‑101 GTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTT < 1:1552098/101‑1 GTGGGTAGTAAAGCGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGATGCGATTT > 1:81499/1‑101 GTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAG < 1:635390/101‑1 GTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAG > 1:16399/1‑101 TAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGG > 1:92568/1‑101 AAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGG < 1:1128507/101‑1 GTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATA < 1:1009397/101‑1 TGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAA > 1:698540/1‑101 GTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGA < 2:1138316/101‑1 GTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGA < 1:221213/101‑1 CAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCG > 2:331496/1‑101 GAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATGAGATGCGCA < 1:211197/101‑1 GAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCA < 2:1486000/101‑1 GAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCAT < 2:71384/101‑1 TAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCC > 2:397004/1‑101 GCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAa > 1:341828/1‑100 AATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATA < 1:138119/101‑1 AATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATA > 2:1499820/1‑101 ATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAa > 2:392253/1‑100 ATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAa > 1:647971/1‑100 TTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAag > 1:659894/1‑99 TAACTATTTGCCGGATGCTGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGAATCGCATCCaccaaaactg > 2:1669106/1‑91 ACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAagtgc < 1:1705970/101‑6 ACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAagtgc > 2:935227/1‑96 TATTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGATGCGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAagtgccg > 2:436231/1‑94 ||||||||||||||||||| GAATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAAGAGCAATTAACTATTTGCCGGATGCGGCGTAAACGCCTTATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGC > 51/15466‑15513 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |