breseq  version 0.35.7  revision b7a44cd89118
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal read alignment evidence (highest frequency 20 of 653 shown, sorted by frequency from high to low)
  seq id position ref new freq score (cons/poly) reads annotation genes product
*13312,7580TC78.9% 648.3 / 166.5 322intergenic (–/–)–/––/–
*13312,7140TC74.9% 350.4 / 165.8 259intergenic (–/–)–/––/–
*918,4130TG74.0% 385.4 / 156.1 223intergenic (–/–)–/––/–
*8719,4780CT73.4% 258.3 / 109.3 158intergenic (–/–)–/––/–
*1332,1280TC71.5% 211.9 / 95.7 138intergenic (–/–)–/––/–
*1332,0030AG67.7% 221.8 / 159.2 186intergenic (–/–)–/––/–
*5914,3840TC67.0% 111.3 / 72.5 91intergenic (–/–)–/––/–
*7621,5320TC65.7% 73.8 / 62.7 70intergenic (–/–)–/––/–
*12413,8360TC65.2% 47.8 / 39.3 46intergenic (–/–)–/––/–
*6221,2250CT64.8% 132.4 / 123.3 128intergenic (–/–)–/––/–
*1298,9620CT63.8% 62.3 / 65.2 69intergenic (–/–)–/––/–
*13312,6980CG63.5% 60.1 / 190.9 204intergenic (–/–)–/––/–
*774,1990TC63.2% 38.2 / 90.1 95intergenic (–/–)–/––/–
*1130,1471.T62.5% 586.8 / inf 259intergenic (–/–)–/––/–
*6221,2310TG61.1% 140.6 / 141.9 126intergenic (–/–)–/––/–
*781,4070AG60.7% 131.9 / 176.3 163intergenic (–/–)–/––/–
*6221,2320CA59.7% 58.9 / 170.1 124intergenic (–/–)–/––/–
*417000CT58.5% 65.6 / 144.7 123intergenic (–/–)–/––/–
*312,0730CT58.0% 51.1 / 117.3 100intergenic (–/–)–/––/–
*312,0790AG57.9% 50.0 / 109.5 95intergenic (–/–)–/––/–

Marginal new junction evidence (lowest skew 10 of 220 shown)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 2 = 1030270 (0.000)31 (0.600) 16/174 3.0 51.7% intergenic (–/–) –/– –/–
?66 13336 = 58 (1.140)intergenic (–/–) –/– –/–
* ? 115 = 962677 (1.130)30 (0.440) 21/200 3.1 43.8% intergenic (–/–) –/– –/–
?17 1 = 0 (0.000)intergenic (–/–) –/– –/–
* ? 111 = 963290 (1.260)32 (0.480) 22/200 3.1 41.6% intergenic (–/–) –/– –/–
?176 1 = 0 (0.000)intergenic (–/–) –/– –/–
* ? 104 = 162310 (0.000)17 (0.360) 7/180 3.1 100% intergenic (–/–) –/– –/–
?15 = 49030 0 (0.000)intergenic (–/–) –/– –/–
* ? 100 = 1281718 (0.300)15 (0.370)
+33 bp
12/134 3.1 71.3% intergenic (–/–) –/– –/–
?145 = 10378 0 (0.000)intergenic (–/–) –/– –/–
* ? 86 = 1507969 (1.030)31 (0.500)
+G
19/198 3.2 47.6% intergenic (–/–) –/– –/–
?90 1 = 0 (0.000)intergenic (–/–) –/– –/–
* ? 4 = 780670 (0.000)20 (0.250) 16/194 3.2 29.8% intergenic (–/–) –/– –/–
?65 7293 = 94 (0.930)intergenic (–/–) –/– –/–
* ? 29 1 =0 (0.000)32 (0.450) 23/196 3.2 52.0% intergenic (–/–) –/– –/–
?58 16302 = 59 (0.850)intergenic (–/–) –/– –/–
* ? 147 1 =0 (0.000)34 (0.530) 19/184 3.2 56.2% intergenic (–/–) –/– –/–
?91 = 8417 53 (0.940)intergenic (–/–) –/– –/–
* ? 145 = 103780 (0.000)15 (0.340)
+33 bp
12/134 3.2 45.3% intergenic (–/–) –/– –/–
?79 = 10783 54 (0.790)intergenic (–/–) –/– –/–