New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 9 35670 =122 (1.730)63 (1.240)
+CCAGTGCGAGCAATATCAACGTGGTTTT
52/144 0.0 42.0% intergenic (–/–) –/– –/–
?9 = 35756 120 (1.700)intergenic (–/–) –/– –/–

Only 100 of 411 total aligned reads displayed.

GAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCG  >  9/35656‑35856
                                                                                                    |                                                                                                    
gAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGcacca                                                                                                      >  2:1314540/1‑101 (MQ=255)
    ttGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGAc                                                                                                  <  1:1691979/101‑1 (MQ=255)
    ttGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGAc                                                                                                  <  1:872883/101‑1 (MQ=255)
    ctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCctcgcaccaaacg                                                                                                  >  1:1155851‑M1/11‑97 (MQ=255)
        gactgtgcgaaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctt                                                                                              <  2:1034290‑M2/96‑9 (MQ=255)
          ctgggcgaaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcga                                                                                            <  2:523034‑M2/97‑11 (MQ=255)
          cAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTaaa                                                                                            >  2:230310/1‑101 (MQ=255)
           tgtgcGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttac                                                                                           >  2:1260053‑M2/3‑90 (MQ=255)
           aaTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGCGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAg                                                                                           <  2:167607/101‑1 (MQ=255)
                gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTg                                                                                      <  2:786883/101‑1 (MQ=255)
                 aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctt                                                                                     <  1:349005‑M2/101‑18 (MQ=255)
                 aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaatcacgatgatatt                                                                                     <  1:1073816‑M2/101‑18 (MQ=255)
                  aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttccttt                                                                                    >  2:17314‑M2/1‑83 (MQ=255)
                  aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGaa                                                                                    <  2:1088230/101‑1 (MQ=255)
                    gTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaa                                                                                  >  1:343398‑M2/1‑81 (MQ=255)
                    gTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttct                                                                                  >  2:1124082‑M2/1‑81 (MQ=255)
                     tGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttctt                                                                                 >  2:1453164‑M2/1‑80 (MQ=255)
                       gCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTTGGGGCTCAAGTCCCCCCCCTCCCCCCACGCCTTTaaaaaacttcatttaa                                                                               >  2:1151216/1‑91 (MQ=255)
                         ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGTGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaa                                                                             >  1:1709480‑M2/1‑76 (MQ=255)
                         ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgttt                                                                             >  1:537324‑M2/1‑76 (MQ=255)
                         ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgttt                                                                             >  1:1551124‑M2/1‑76 (MQ=255)
                          gAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttc                                                                            >  2:161871‑M2/1‑75 (MQ=255)
                          gAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcact                                                                            >  2:360223‑M2/1‑75 (MQ=255)
                            aTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagat                                                                          >  1:919341‑M2/1‑73 (MQ=255)
                            aTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagat                                                                          >  1:1340564‑M2/1‑73 (MQ=255)
                              tgttAGCCGCGCTAGCTTCCGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAGTCaa                                                                        <  2:431285/98‑1 (MQ=255)
                              tGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatga                                                                        >  2:487700‑M2/1‑71 (MQ=255)
                                gTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgact                                                                      <  1:1500142‑M2/101‑33 (MQ=255)
                                gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttcctt                                                                      >  1:696409‑M2/1‑69 (MQ=255)
                                gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttcctt                                                                      >  2:1588469‑M2/1‑69 (MQ=255)
                                gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcga                                                                      <  1:739897‑M2/101‑33 (MQ=255)
                                  aGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaag                                                                    <  1:1190008‑M2/101‑35 (MQ=255)
                                   gACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtg                                                                   <  2:901234‑M2/101‑36 (MQ=255)
                                    aCGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggt                                                                  >  2:735744‑M2/1‑65 (MQ=255)
                                      gcgcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtgg                                                                >  1:1134556‑M2/1‑63 (MQ=255)
                                       cgcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTa                                                               <  1:1625280/101‑1 (MQ=255)
                                        gcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaag                                                              >  2:762122‑M2/1‑61 (MQ=255)
                                        gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                                              <  1:1005872/101‑1 (MQ=255)
                                        gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                                              <  2:312027/101‑1 (MQ=255)
                                         cTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgcaggtggcgg                                                             <  1:849217‑M2/101‑42 (MQ=255)
                                          tAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggt                                                            >  1:895251‑M2/1‑59 (MQ=255)
                                              ttCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcg                                                        <  1:327275‑M2/101‑47 (MQ=255)
                                              ttCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTTCCCCCCCTCGCACCAaatatcttttcttccttttttttttcttccttgattttttattcct                                                        <  1:1519263‑M2/101‑47 (MQ=255)
                                              ttCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattg                                                        <  1:1416872‑M2/101‑47 (MQ=255)
                                               tCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaacccacgttgatattgctcgaactgggcgaaggcggcggaattgg                                                       <  1:1580478‑M2/101‑48 (MQ=255)
                                               tCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCg                                                       <  2:883950/101‑1 (MQ=255)
                                                 aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggta                                                     <  1:466116‑M2/101‑50 (MQ=255)
                                                 aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAg                                                     <  1:652224/101‑1 (MQ=255)
                                                  ggTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTTGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGt                                                    >  2:644592/1‑101 (MQ=255)
                                                    tgtTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAg                                                  <  1:68524/101‑1 (MQ=255)
                                                     gtTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacg                                                 <  1:1281914‑M2/101‑54 (MQ=255)
                                                     gtTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc                                                 >  1:1102980/1‑101 (MQ=255)
                                                     gtTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc                                                 >  1:1225336/1‑101 (MQ=255)
                                                       tggtgtccTTACGGCCGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttctttcttgatttttcatccctgattcaaat                                               >  2:373912‑M2/3‑46 (MQ=255)
                                                       tAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggta                                               <  1:904086‑M2/101‑56 (MQ=255)
                                                         gtgtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtaga                                             <  1:621000‑M2/101‑58 (MQ=255)
                                                           gtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacg                                           <  1:1462539‑M2/101‑60 (MQ=255)
                                                            tCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcatt                                          >  1:792846‑M2/1‑41 (MQ=255)
                                                             ccTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcatta                                         >  1:210854‑M2/1‑40 (MQ=255)
                                                             ccTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTg                                         >  2:267050/1‑101 (MQ=255)
                                                             ccTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTg                                         >  2:1285633/1‑101 (MQ=255)
                                                              cTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgc                                        <  2:9599‑M2/101‑63 (MQ=255)
                                                              cTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgtaggtggcggaattggtagacgcgctagctt                                        <  2:408111‑M2/101‑63 (MQ=255)
                                                                tACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatca                                      >  1:24656‑M2/1‑37 (MQ=255)
                                                                 aCGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaatccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcag                                     >  1:636615‑M2/1‑36 (MQ=255)
                                                                  cGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatc                                    <  1:1318122‑M2/101‑67 (MQ=255)
                                                                    gACGTGGGGGTTCAAGCCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtg                                  >  1:1068543‑M2/1‑33 (MQ=255)
                                                                      cGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgtt                                <  2:1340558‑M2/101‑71 (MQ=255)
                                                                        tGGGGGTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcagg                              >  1:98906‑M2/1‑29 (MQ=255)
                                                                          ggggTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgat                            <  1:290363‑M2/101‑75 (MQ=255)
                                                                          ggggTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgat                            >  2:1558909‑M2/1‑27 (MQ=255)
                                                                          ggggTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgat                            >  1:441193‑M2/1‑27 (MQ=255)
                                                                          ggggTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcagctg                            >  2:840793‑M2/1‑27 (MQ=255)
                                                                             gTTCAAGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgcc                         <  1:499086‑M2/101‑78 (MQ=255)
                                                                             gTTCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgtta                         <  2:1701594‑M2/101‑78 (MQ=255)
                                                                             gTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGttt                         >  1:372850/1‑101 (MQ=255)
                                                                             gTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGttt                         <  2:562747/101‑1 (MQ=255)
                                                                              ttCAAGTCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttag                        <  2:459202‑M2/101‑79 (MQ=255)
                                                                               tCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttctt                       >  1:1431687‑M2/1‑22 (MQ=255)
                                                                               tCAAGTCCCCCCCCTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttctt                       >  2:500879‑M2/1‑22 (MQ=255)
                                                                               tCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTgg                       <  2:345005/101‑1 (MQ=255)
                                                                                taaGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTggg                      <  2:72025/100‑1 (MQ=255)
                                                                                  aGTCCCCCCCCTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaa                    >  1:408116‑M2/1‑19 (MQ=255)
                                                                                  aGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAc                    <  1:1390583/101‑1 (MQ=255)
                                                                                    tCCCCCCCCTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttagcgtcct                  >  2:1500136‑M2/1‑17 (MQ=255)
                                                                                      cccccccTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaataag                >  2:580238‑M2/1‑15 (MQ=255)
                                                                                      cccccccTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttcttacggacg                <  2:1652717‑M2/101‑87 (MQ=255)
                                                                                      cccccccTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttcttacggacg                >  1:722223‑M2/1‑15 (MQ=255)
                                                                                       ccccccTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaataagt               >  2:1519257‑M2/1‑14 (MQ=255)
                                                                                          cccTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgtccttacgga            <  2:914535‑M2/101‑91 (MQ=255)
                                                                                           ccTCGCACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgtccttacggac           <  1:580243‑M2/101‑92 (MQ=255)
                                                                                           ccTCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttcttacggacgtgggg           <  2:655676‑M2/101‑92 (MQ=255)
                                                                                           ccTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTc           >  2:1433085/1‑101 (MQ=255)
                                                                                            cTCGCACCAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaataagtgccag          >  1:31891‑M2/1‑9 (MQ=255)
                                                                                             tCGCACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttcttacggacgtgggggt         >  2:1204446‑M2/1‑8 (MQ=255)
                                                                                                cACCAaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgtccttacggacgtggg      >  2:1070589‑M2/1‑5 (MQ=255)
                                                                                                cACCAaaaaccacgttgatattgctcgcactgggcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgttcttacggacgtgggggttca      <  2:333200‑M2/101‑97 (MQ=255)
                                                                                                  ccAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaataagtgccaggcacga    <  2:595677‑M2/101‑99 (MQ=255)
                                                                                                   cAattatctttacttcctttcttgtttcttccttgatttttcatccctgattcaaattcattatcatcagcatgatgccagcaataagtgccaggcacgat   >  1:1034295‑M2/1‑2 (MQ=255)
                                                                                                    aaacgaggcgatatcaaaaaaagtaagatgactgtgcgaaggtggcggaattggtagacgcgctagcttcaggtgttagtgtccttacggacgtggggggt  <  1:595894‑M2/101‑101 (MQ=255)
                                                                                                    |                                                                                                    
GAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCG  >  9/35656‑35856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.