New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 85 | = 16563 | 47 (0.710) | 55 (0.980) | 40/168 | 0.4 | 73.6% | intergenic (–/–) | –/– | –/– |
? | 95 | = 17216 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAACTTTTTTGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGGGAATAGCTCAGT > 95/17116‑17232 | aaaCTTTTTTGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAc < 1:1022790/101‑1 (MQ=255) aaaCTTTTTTGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAc < 1:1349707/101‑1 (MQ=255) aaaCTTTTTTGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAc < 2:656148/101‑1 (MQ=255) ttttttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgg < 2:1627289‑M2/101‑5 (MQ=255) ttttttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgg < 1:380546‑M2/101‑5 (MQ=255) ttttttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgg < 2:1465130‑M2/101‑5 (MQ=255) tttttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcggg > 2:1593943‑M2/1‑96 (MQ=255) ttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaat > 1:1679034‑M2/1‑93 (MQ=255) ttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaat > 2:876792‑M2/1‑93 (MQ=255) ttGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaat > 1:905989‑M2/1‑93 (MQ=255) tGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaata > 2:8986‑M2/1‑92 (MQ=255) tGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaata < 1:934609‑M2/101‑10 (MQ=255) ggggggTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatag > 1:113848‑M2/1‑91 (MQ=255) ggggTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagct < 2:849588‑M2/101‑13 (MQ=255) ggTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctca > 2:291801‑M2/1‑87 (MQ=255) ggTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctca < 2:341176‑M2/101‑15 (MQ=255) gTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcag < 2:1149296‑M2/101‑16 (MQ=255) tGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatatctcagtt > 1:1167206‑M2/1‑84 (MQ=255) tGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagtt > 1:1291508‑M2/1‑84 (MQ=255) cAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttgg > 2:916384‑M2/1‑82 (MQ=255) gagGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggta < 1:1292577‑M2/101‑22 (MQ=255) gggAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtaga < 2:168879‑M2/101‑24 (MQ=255) gggAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtaga < 1:604494‑M2/101‑24 (MQ=255) ggAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagag < 1:37322‑M2/101‑25 (MQ=255) gAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagc < 2:1346858‑M2/101‑26 (MQ=255) aaaGATTTCTCGTATAATGCGCCTCCCGTAACGATGCAGAAATGTTAAACATACAAAAGCAAAATTAGGCAGTATgggggaatagctcagttggtagagca > 2:744921‑M2/1‑75 (MQ=255) aGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacg < 1:1564977‑M2/101‑29 (MQ=255) tctcGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgacctt > 1:5191‑M2/1‑68 (MQ=255) ctcGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttgggagagcccgcccttg < 1:856888‑M2/101‑35 (MQ=255) gTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgcca < 1:879500‑M2/101‑38 (MQ=255) taATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaagg < 1:452985‑M2/101‑41 (MQ=255) aaTGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggt > 1:197342‑M2/1‑60 (MQ=255) aaTGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGGACgcgggaatagctcagttggtagagcacgaccttgccaaggt < 2:1695100‑M2/101‑42 (MQ=255) aTGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtc < 2:990083‑M2/101‑43 (MQ=255) cgcCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggg < 2:207060‑M2/101‑46 (MQ=255) cTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtc < 2:1207469‑M2/101‑49 (MQ=255) tCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcg < 1:1493434‑M2/101‑50 (MQ=255) cccGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgc < 1:437127‑M2/101‑51 (MQ=255) cccGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgc < 2:1143226‑M2/101‑51 (MQ=255) gTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgag > 1:1207474‑M2/1‑48 (MQ=255) tAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAAgcgggaatagctcagttggtagagcccgtcctccccaaggtcgcgctcgcgagt > 2:1135912‑M2/1‑47 (MQ=255) aaCGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagtt < 1:609874‑M2/101‑56 (MQ=255) acgacgCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttc < 2:1479932‑M2/101‑57 (MQ=255) cgacgCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcg < 2:1197864‑M2/101‑58 (MQ=255) cgCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagt > 2:128803‑M2/1‑41 (MQ=255) cAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtct > 2:716882‑M2/1‑39 (MQ=255) aGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctc < 2:1561833‑M2/101‑64 (MQ=255) aGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctc < 1:420211‑M2/101‑64 (MQ=255) gAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcg < 2:944956‑M2/101‑65 (MQ=255) gAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcg < 1:657343‑M2/101‑65 (MQ=255) gAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcg > 1:956895‑M2/1‑37 (MQ=255) aaaTGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgt < 2:58673‑M2/101‑66 (MQ=255) aaaTGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgt < 1:1024037‑M2/101‑66 (MQ=255) aaaTGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgt < 2:611434‑M2/101‑66 (MQ=255) aaTGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtt > 2:316772‑M2/1‑35 (MQ=255) aaTGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtt < 2:662639‑M2/101‑67 (MQ=255) tGCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttc < 2:1282722‑M2/101‑69 (MQ=255) gCGAAAATTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcc > 1:1500649‑M2/1‑32 (MQ=255) aaaTTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgct > 1:1537897‑M2/1‑28 (MQ=255) aTTACGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctcc < 1:108678‑M2/101‑76 (MQ=255) cGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaa < 2:1420117‑M2/101‑80 (MQ=255) cGAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaa < 2:1083716‑M2/101‑80 (MQ=255) gAAAGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaat < 1:636945‑M2/101‑81 (MQ=255) aaGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaattt < 2:97213‑M2/101‑83 (MQ=255) aGCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttt < 2:273674‑M2/101‑84 (MQ=255) gCAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttga < 1:131864‑M2/101‑85 (MQ=255) cAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttgaa > 1:1083721‑M2/1‑16 (MQ=255) cAAAATTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatatgaa < 2:367441‑M2/101‑86 (MQ=255) aaaaTTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttgaaa < 1:805894‑M2/101‑87 (MQ=255) aaaTTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttgaaaa < 2:351026‑M2/101‑88 (MQ=255) aaTTAAGTAGTACgcgggaatatctcagttggtagagcacgaccttgccaaggtcgggttcgcgagttcgagtctcgtttcccgctccaaaatttgaaaag > 2:856318‑M2/1‑13 (MQ=255) aaTTAAGTAGTACgcgggaatagctcagttggtagagcacgaccttgccaaggtcggggtcgcgagttcgagtctcgtttcccgctccaaaatttgaaaag < 2:631669‑M2/101‑89 (MQ=255) | AAACTTTTTTGGGGGGTTGCAGAGGGAAAGATTTCTCGTATAATGCGCCTCCCGTAACGACGCAGAAATGCGAAAATTACGAAAGCAAAATTAAGTAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGGGAATAGCTCAGT > 95/17116‑17232 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |