New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 39 | 31074 = | 61 (1.120) | 22 (0.410) | 18/190 | 3.0 | 43.2% | intergenic (–/–) | –/– | –/– |
? | 89 | = 18547 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGAT > 89/18451‑18552 | gtgGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcgga > 2:1403316‑M2/2‑97 (MQ=255) tGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggat < 2:161519‑M2/101‑6 (MQ=255) tGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggat < 1:62842‑M2/101‑6 (MQ=255) aCGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataagg > 2:904891‑M2/1‑92 (MQ=255) cGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggc > 2:97934‑M2/1‑91 (MQ=255) ggATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcg < 2:570230‑M2/101‑12 (MQ=255) gATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGACGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgt < 1:1506216‑M2/101‑13 (MQ=255) aTTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgtt < 1:1606015‑M2/101‑14 (MQ=255) aTTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgtt > 1:747406‑M2/1‑88 (MQ=255) tGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttca > 2:589633‑M2/1‑86 (MQ=255) aaaCAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacg > 2:1535155‑M2/1‑84 (MQ=255) aaCAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgc < 1:1055666‑M2/101‑19 (MQ=255) aCAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgcc < 1:107909‑M2/101‑20 (MQ=255) aCAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGCCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgcc > 2:316549‑M2/1‑82 (MQ=255) tGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcat < 1:303551‑M2/101‑24 (MQ=255) gCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatcc > 1:157597‑M2/1‑76 (MQ=255) cTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccg < 2:149229‑M2/101‑27 (MQ=255) gagCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgat > 2:916574‑M2/1‑52 (MQ=255) gCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgt < 2:1599853‑M2/101‑52 (MQ=255) tGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgac < 1:1122114‑M2/101‑55 (MQ=255) tGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgac > 1:1057086‑M2/1‑47 (MQ=255) aaaaaGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgacgctt < 2:262059‑M2/101‑59 (MQ=255) aaaaGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgacgctta > 2:886287‑M2/1‑42 (MQ=255) aaaGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgacgcttac > 2:1604359‑M2/1‑41 (MQ=255) aaaGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGCcggataaggcgttcacgccgcatccggcatccgagcaccattgcctgatgtgacgcttac > 1:189669‑M2/1‑41 (MQ=255) | TTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAAGGCCAAAACATCGCTTCATCTCGTAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGAT > 89/18451‑18552 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |