| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 39 | 1 = | 0 (0.000) | 45 (1.060) +GTAAACGCCTTATCCGGCCTAC |
39/156 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 80 | = 21134 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTTAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 80/21038‑21134 | gTTAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtag < 1:365392‑M2/101‑5 (MQ=255) ttAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtagg > 2:1178445‑M2/1‑96 (MQ=255) tAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggc > 1:1444876‑M2/1‑95 (MQ=255) ttGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccgg > 2:362018‑M2/1‑92 (MQ=255) gAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggat > 1:471063‑M2/1‑90 (MQ=255) aaaGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggata < 1:1013887‑M2/101‑13 (MQ=255) aGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataag < 1:1191835‑M2/101‑15 (MQ=255) aGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataag > 1:1313139‑M2/1‑87 (MQ=255) aGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataag > 1:796791‑M2/1‑87 (MQ=255) gACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacg < 1:960631‑M2/101‑24 (MQ=255) aCAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgc > 2:1302605‑M2/1‑77 (MQ=255) aaGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccg < 1:683347‑M2/101‑27 (MQ=255) gTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgca < 1:732179‑M2/101‑29 (MQ=255) tataAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcat < 2:1491882‑M2/101‑30 (MQ=255) tataAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtacgccggataaggcgtttacgccgcat < 1:1617412‑M2/101‑30 (MQ=255) ataAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggctggacaaggcgtttacgccgcatc < 2:107914‑M2/101‑31 (MQ=255) gCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaag > 2:789179‑M2/1‑64 (MQ=255) cccGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaaga < 1:1549625‑M2/101‑39 (MQ=255) cGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaag < 2:1055884‑M2/101‑41 (MQ=255) cgcAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagcagacata < 2:1644170‑M2/101‑46 (MQ=255) cgcAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacata > 2:676954‑M2/1‑56 (MQ=255) cgcAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacata < 2:1370423‑M2/101‑46 (MQ=255) cgcAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacata > 2:737949‑M2/1‑56 (MQ=255) gcAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatat > 1:1244107‑M2/1‑55 (MQ=255) gTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcac < 2:963576‑M2/101‑51 (MQ=255) tttATCGTGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcact > 1:1360163‑M2/1‑50 (MQ=255) tttATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcact > 1:1577647‑M2/1‑50 (MQ=255) tATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcacttt > 1:829177‑M2/1‑48 (MQ=255) aTCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttg > 1:209089‑M2/1‑47 (MQ=255) cGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtc > 2:818522‑M2/1‑45 (MQ=255) gggTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtca > 1:252057‑M2/1‑44 (MQ=255) ggTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcac > 2:1630111‑M2/1‑43 (MQ=255) gTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcact < 2:1658401‑M2/101‑60 (MQ=255) aTGGGGGCAATCCCAATTTATCGATTTTGCGAGCACTTgtaggccggaaaaggcctttccgccgcatccggcaagaagacatatgcactttgtcactaatc > 2:1487613‑M2/1‑38 (MQ=255) gggggCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatcca < 1:910795‑M2/101‑66 (MQ=255) ggCAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccacta > 1:1055889‑M2/1‑33 (MQ=255) cAATCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactaca > 2:1081264‑M2/1‑31 (MQ=255) aaTCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacag < 2:403067‑M2/101‑72 (MQ=255) aaTCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacag < 2:227537‑M2/101‑72 (MQ=255) aTCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacagg > 2:673539‑M2/1‑29 (MQ=255) aTCGCAATTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacagg < 1:1474985‑M2/101‑73 (MQ=255) aaTTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacatt < 2:1332183‑M2/101‑78 (MQ=255) aaTTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacatt > 2:1013882‑M2/1‑24 (MQ=255) aTTTATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattt > 1:715729‑M2/1‑23 (MQ=255) tttATCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacatttt > 2:1499311‑M2/1‑22 (MQ=255) tATCGATTTTGCGAGCTCTGgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttat > 2:445739‑M2/1‑20 (MQ=255) aTCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatg > 2:153575‑M2/1‑19 (MQ=255) aTCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatg > 1:97642‑M2/1‑19 (MQ=255) aTCGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatg < 1:535721‑M2/101‑83 (MQ=255) cGATTTTGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactgatccactacaggacattttatgat < 1:1117596‑M2/101‑85 (MQ=255) ttttGCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatgatcag > 1:753980‑M2/1‑14 (MQ=255) gCGAGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatgatcagttca > 1:963581‑M2/1‑10 (MQ=255) aGCACTTgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatgatcagttcatta < 1:1223579‑M2/101‑95 (MQ=255) ttgtaggccggataaggcgtttacgccgcatccggcaagaagacatatgcactttgtcactaatccactacaggacattttatgatcagttcattatggat > 2:171902‑M2/1‑2 (MQ=255) | GTTAATTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATTTTGCGAGCACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 80/21038‑21134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |