New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 36 | 13713 = | 76 (1.070) | 33 (0.500) | 23/200 | 2.9 | 46.5% | intergenic (–/–) | –/– | –/– |
? | 91 | = 18160 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 91/18060‑18160 | cAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTgg < 1:1110973/101‑1 (MQ=255) cAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTgg < 1:418251/101‑1 (MQ=255) cgacgaAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaat > 1:1143886‑M2/1‑98 (MQ=255) gacgaAATCCCGGAAGCGGCAAAAGAGATCATGCGTGATATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatc > 2:1367054‑M2/1‑97 (MQ=255) gacgaAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatc > 2:199039‑M2/1‑97 (MQ=255) acgaAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcg < 2:6736‑M2/101‑6 (MQ=255) aaaTCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcct < 2:643884‑M2/101‑9 (MQ=255) aaTCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctg > 1:161822‑M2/1‑92 (MQ=255) cccGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAAGCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatg > 1:749584‑M2/1‑89 (MQ=255) aGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctac > 2:223347‑M2/1‑83 (MQ=255) aGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctac < 1:1586472‑M2/101‑19 (MQ=255) aGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctac > 2:838321‑M2/1‑83 (MQ=255) aGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctac > 1:129807‑M2/1‑83 (MQ=255) aaaaGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttat > 1:1399444‑M2/1‑77 (MQ=255) aaaaGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttat < 1:235672‑M2/101‑25 (MQ=255) aaaGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatc < 2:1311308‑M2/101‑26 (MQ=255) aaGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatca > 1:586303‑M2/1‑75 (MQ=255) agagATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcag > 1:834079‑M2/1‑74 (MQ=255) gaTCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcc > 2:929005‑M2/1‑71 (MQ=255) aTGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacg > 1:128236‑M2/1‑67 (MQ=255) tGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcata > 1:262504‑M2/1‑62 (MQ=255) gagaTGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatat > 1:31525‑M2/1‑61 (MQ=255) ggggATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaa < 2:16209‑M2/101‑46 (MQ=255) tAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttatt > 2:1334746‑M2/1‑50 (MQ=255) tAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttatt < 2:392081‑M2/101‑52 (MQ=255) aCCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattga > 1:1352702‑M2/1‑48 (MQ=255) aCCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattga < 1:748171‑M2/101‑54 (MQ=255) cGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGGGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatt < 2:1048718‑M2/101‑57 (MQ=255) ggAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaattt < 1:711220‑M2/101‑58 (MQ=255) agaCGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgc < 1:652993‑M2/101‑60 (MQ=255) gaCGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgca > 1:1242204‑M2/1‑41 (MQ=255) aCGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgcac > 2:963767‑M2/1‑40 (MQ=255) cGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgcacg > 2:813294‑M2/1‑39 (MQ=255) ntgGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgcacga < 1:445702‑M2/100‑64 (MQ=255) gTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGGaatcgcctgatgcgctacgcttatcaggcctacgtcatattgcaatttattgaatttgcacga < 1:1432548‑M2/101‑64 (MQ=255) | CAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCAAAAAAGAGCGGCGCGGAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 91/18060‑18160 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |