New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 = 6980 (0.000)51 (0.060)
+AGT
42/194 0.6 100% intergenic (–/–) –/– –/–
?85 = 19737 0 (0.000)intergenic (–/–) –/– –/–

TACTCATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  85/19637‑19737
                                                                                                    |                                                                                     
tACTCATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCa                                                                                       >  1:1343764/1‑101 (MQ=255)
  cTCATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTACCGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAac                                                                                     >  2:505730‑M2/1‑99 (MQ=255)
  cTCATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAac                                                                                     >  1:1052917‑M2/1‑99 (MQ=255)
    cATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAactt                                                                                   >  2:237266‑M2/1‑97 (MQ=255)
     aTGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAactta                                                                                  <  2:502101‑M2/101‑6 (MQ=255)
       gTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttact                                                                                >  1:1266360‑M2/1‑94 (MQ=255)
        tCCATTATCGCCACGTCAACGGCATTTGCCCGACACCTCTGAACGGCGTCTTCACCGCACGATTCCTCACCGACGACTTTGGTGATGCTGCCAacttgctg                                                                               >  2:1536206‑M2/1‑93 (MQ=255)
         ccATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactga                                                                              <  1:338483‑M2/101‑10 (MQ=255)
          cATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgat                                                                             <  2:1038034‑M2/101‑11 (MQ=255)
          cATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgat                                                                             >  1:60752‑M2/1‑91 (MQ=255)
            ttAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCATCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgattt                                                                           >  2:425475‑M2/1‑89 (MQ=255)
             tAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgattta                                                                          >  1:884963‑M2/1‑88 (MQ=255)
              aGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttag                                                                         >  1:457110‑M2/1‑87 (MQ=255)
               gCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagt                                                                        >  2:341926‑M2/1‑86 (MQ=255)
               gCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagt                                                                        >  2:1404381‑M2/1‑86 (MQ=255)
                caccacGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtg                                                                       <  1:1003163‑M2/101‑17 (MQ=255)
                 accacGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgt                                                                      <  1:312659‑M2/101‑18 (MQ=255)
                   cacGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtat                                                                    <  2:229170‑M2/101‑20 (MQ=255)
                    acGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatg                                                                   <  1:1025547‑M2/101‑21 (MQ=255)
                      gTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgat                                                                 <  2:1368106‑M2/101‑23 (MQ=255)
                      gTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgat                                                                 >  1:617754‑M2/1‑79 (MQ=255)
                        cAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatgg                                                               >  2:633815‑M2/1‑77 (MQ=255)
                          aCGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtg                                                             >  2:1592786‑M2/1‑75 (MQ=255)
                               aTTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgttttt                                                        <  1:712136‑M2/101‑32 (MQ=255)
                               aTTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgttttt                                                        >  1:252580‑M2/1‑70 (MQ=255)
                               aTTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggggttttt                                                        <  1:357776‑M2/101‑32 (MQ=255)
                               aTTTGCCCGACACCACTTAACGGCGTCTTCACCGCAAGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgttttt                                                        <  1:1697601‑M2/101‑32 (MQ=255)
                                tttGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCGCCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttg                                                       >  2:1626125‑M2/1‑69 (MQ=255)
                                     ccGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtg                                                  >  1:1690759‑M2/1‑64 (MQ=255)
                                       gACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgct                                                >  1:419967‑M2/1‑62 (MQ=255)
                                        acacCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctc                                               <  2:265021‑M2/101‑41 (MQ=255)
                                          accacTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctcca                                             >  2:712131‑M2/1‑59 (MQ=255)
                                          accacTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctcca                                             <  1:471541‑M2/101‑43 (MQ=255)
                                              cTTAACGGCGTCTTCCCCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg                                         >  1:360737‑M2/1‑55 (MQ=255)
                                                tAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                       >  1:846561‑M2/1‑53 (MQ=255)
                                                 aaCGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                      <  1:1202203‑M2/101‑50 (MQ=255)
                                                      cGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                 <  2:898253‑M2/101‑55 (MQ=255)
                                                       gTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                >  1:959890‑M2/1‑46 (MQ=255)
                                                       gTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                <  1:281695‑M2/101‑56 (MQ=255)
                                                             aCCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                          >  1:426757‑M2/1‑40 (MQ=255)
                                                             aCCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                          >  1:883872‑M2/1‑40 (MQ=255)
                                                                  aCGATGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                     >  2:309918‑M2/1‑35 (MQ=255)
                                                                      tGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggttctccagtggcttctgtttctatcagctgtccct                 <  2:1509167‑M2/101‑71 (MQ=255)
                                                                      tGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                 <  1:524847‑M2/101‑71 (MQ=255)
                                                                      tGCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                 <  1:140381‑M2/101‑71 (MQ=255)
                                                                       gCCTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                >  2:785599‑M2/1‑30 (MQ=255)
                                                                         cTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct              <  2:177365‑M2/101‑74 (MQ=255)
                                                                         cTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct              <  2:785454‑M2/101‑74 (MQ=255)
                                                                         cTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct              <  1:520454‑M2/101‑74 (MQ=255)
                                                                         cTCACCGACGACTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagatgtccctccc              <  2:14820‑M2/101‑74 (MQ=255)
                                                                                acgacTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc       <  2:1184394‑M2/101‑81 (MQ=255)
                                                                                   acTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac    <  2:49262‑M2/101‑84 (MQ=255)
                                                                                    cTTTGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact   >  2:312659‑M2/1‑17 (MQ=255)
                                                                                     tttGGTGATGCTGCCAacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg  >  2:245339‑M2/1‑16 (MQ=255)
                                                                                                    |                                                                                     
TACTCATGTCCATTAGCACCACGTCAACGGCATTTGCCCGACACCACTTAACGGCGTCTTCACCGCACGATGCCTCACCGACGACTTTGGTGATGCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  85/19637‑19737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.