| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 65 (0.080) +AGTTGGCAGCATCACC |
52/168 | 0.1 | 89.1% | intergenic (–/–) | –/– | –/– |
| ? | 81 | = 2325 | 19 (0.290) | intergenic (–/–) | –/– | –/– | |||||
GACGTTCCGCTGATATTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTGGG > 81/2227‑2425 | gaCGTTCCGCTGATATTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGgg > 2:640598‑M2/1‑99 (MQ=255) cGTTCCGCTGATATTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtg < 1:1350577‑M2/101‑5 (MQ=255) tCCGCTGATATTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggagacg < 1:1311740‑M2/101‑8 (MQ=255) tatTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaac < 1:1253578‑M2/101‑16 (MQ=255) atTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaact < 2:93867‑M2/101‑17 (MQ=255) tttACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaactt < 1:351365‑M2/101‑18 (MQ=255) tttACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaactt < 1:1131700‑M2/101‑18 (MQ=255) tttACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaactt > 2:1338630‑M2/1‑84 (MQ=255) tACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttac < 2:1360112‑M2/101‑20 (MQ=255) cATACGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactg < 2:189247‑M2/101‑22 (MQ=255) atcggGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgat < 1:916936‑M2/99‑24 (MQ=255) ggTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttag < 2:819211‑M2/101‑28 (MQ=255) tCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtg < 2:684970‑M2/101‑30 (MQ=255) cAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgt < 1:633096‑M2/101‑31 (MQ=255) atatAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtat > 1:134551‑M2/1‑69 (MQ=255) atatAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtat > 1:8957‑M2/1‑69 (MQ=255) atatAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtat < 2:1334197‑M2/101‑33 (MQ=255) tataAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatg > 1:901857‑M2/1‑68 (MQ=255) tataAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctcccaacttactgatttagtgtatg < 2:1240262‑M2/101‑34 (MQ=255) taAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgat > 1:1066756‑M2/1‑66 (MQ=255) aaaCCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatg > 2:1667788‑M2/1‑65 (MQ=255) aaaCCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatg > 2:278735‑M2/1‑65 (MQ=255) aaaCCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatg < 1:315654‑M2/101‑37 (MQ=255) ccGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtg > 2:351365‑M2/1‑62 (MQ=255) ccGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtg > 1:1233782‑M2/1‑62 (MQ=255) gCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:1029869‑M2/1‑60 (MQ=255) cACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgttt > 2:1350571‑M2/1‑59 (MQ=255) cACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgttt > 2:1382000‑M2/1‑59 (MQ=255) aCCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 2:82734‑M2/1‑58 (MQ=255) aCCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttt < 1:1718199‑M2/101‑44 (MQ=255) cccGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgttttt > 1:207274‑M2/1‑57 (MQ=255) ccGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg > 2:633091‑M2/1‑56 (MQ=255) gCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:1155899‑M2/1‑54 (MQ=255) gCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:1521589‑M2/1‑54 (MQ=255) gAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg < 1:609379‑M2/101‑51 (MQ=255) aaTGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 1:753940‑M2/1‑48 (MQ=255) aaTGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGcc < 1:1571978/101‑1 (MQ=255) gTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag > 2:1131695‑M2/1‑45 (MQ=255) gTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag < 1:1134386‑M2/101‑57 (MQ=255) cGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt > 1:798840‑M2/1‑39 (MQ=255) ggTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 1:108816‑M2/101‑64 (MQ=255) gTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct < 2:1636343‑M2/101‑65 (MQ=255) tCAAACATAGTAATCAATGCGGGGTTACGGATGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 2:473196‑M2/1‑36 (MQ=255) cAAACATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt < 1:1450443‑M2/101‑67 (MQ=255) aaaCATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 1:93867‑M2/1‑34 (MQ=255) aaaCATAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgttgttgaggtgctccagtggcttctgtt < 1:463480‑M2/101‑68 (MQ=255) aTAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta > 2:220506‑M2/1‑30 (MQ=255) tAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 2:609463‑M2/1‑29 (MQ=255) tAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 1:348436‑M2/1‑29 (MQ=255) tAGTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 1:62602‑M2/1‑29 (MQ=255) gTAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca > 2:961177‑M2/1‑27 (MQ=255) tAATCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 2:238029‑M2/101‑76 (MQ=255) aTCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct > 1:479864‑M2/1‑24 (MQ=255) aTCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct < 2:506103‑M2/101‑78 (MQ=255) aTCAATGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct > 1:924234‑M2/1‑24 (MQ=255) aTCAATGCGGGGTTACGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTg > 1:1525077/1‑101 (MQ=255) aaTGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc < 1:1463206‑M2/101‑81 (MQ=255) aTGCGGGGTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc > 1:1360118‑M2/1‑20 (MQ=255) aTGCGGGGTTACGGCTGACGggtgatgccgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc < 2:89813‑M2/101‑82 (MQ=255) gtcattacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGcc < 2:761635/92‑1 (MQ=255) tcattacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCt < 1:150389/93‑1 (MQ=255) ggggTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc > 1:466621‑M2/1‑16 (MQ=255) ggggTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc < 2:328818‑M2/101‑86 (MQ=255) ggggTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc < 2:404214‑M2/101‑86 (MQ=255) cattacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTg < 1:1213997/94‑1 (MQ=255) cattacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTg > 2:10985/8‑101 (MQ=255) cattacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTg > 2:1119858/8‑101 (MQ=255) attacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGc < 1:386524/95‑1 (MQ=255) tacccGGCTGACGTTACCTGCATCATCGGCAATTGGGCGTTCCCCTGAATAAGCCCGGGCCAGGGCAGAGGAAGGAAATTCGTTTAACTGAAAGCCTGCCg > 1:116624/5‑101 (MQ=255) tacccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCg > 2:912817/5‑101 (MQ=255) gTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt > 2:1311734‑M2/1‑13 (MQ=255) gTTACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt < 1:503443‑M2/101‑89 (MQ=255) ttACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt > 2:732777‑M2/1‑12 (MQ=255) tACGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 1:813281‑M2/101‑91 (MQ=255) cccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGAc < 2:838906/99‑1 (MQ=255) cccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGAc > 1:68489/3‑101 (MQ=255) ccGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGAcc < 1:326690/100‑1 (MQ=255) aCGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca > 1:29657‑M2/1‑10 (MQ=255) cGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag < 2:1524925‑M2/101‑93 (MQ=255) cGGCTGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 1:1552784‑M2/1‑9 (MQ=255) ggCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAg < 2:1025268/101‑1 (MQ=255) tGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac < 2:1197521‑M2/101‑97 (MQ=255) tGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac < 1:403920‑M2/101‑97 (MQ=255) tGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac < 1:847050‑M2/101‑97 (MQ=255) aCGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTg < 1:936408/101‑1 (MQ=255) gTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTggg > 1:1495673/1‑101 (MQ=255) gTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTggg > 2:624764/1‑101 (MQ=255) gTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTggg < 2:454529/101‑1 (MQ=255) gTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTggg > 1:1011851/1‑101 (MQ=255) | GACGTTCCGCTGATATTTACATCCGGGTCAATATAAACCGCACCCGCAGAAAATGTCGGGCGGTCAAACATAGTAATCAATGCGGGGTTACGGCTGACGTTACCTGCATCATCGGCAATTGCGCCTTCCCCTGAATAAGCCCGGCCCAGGCCAGAGGAAGAAAATTCGTTTAACTGAAAGCCTGCCGACCAGGCCTGGG > 81/2227‑2425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |