New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 = 6980 (0.000)64 (0.080)
+AGTTGGCAGCATCACC
53/168 0.1 100% intergenic (–/–) –/– –/–
?71 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGC  >  71/1‑100
                                                                                                   |                                                                                                   
tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGt                                                                                                    >  1:1015881‑M2/100‑101 (MQ=255)
tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGt                                                                                                    <  2:778626‑M2/2‑1 (MQ=255)
 cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGtt                                                                                                   >  1:2914‑M2/99‑101 (MQ=255)
 cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGtt                                                                                                   >  2:119628‑M2/99‑101 (MQ=255)
      gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGttttttt                                                                                              <  2:318637‑M2/8‑1 (MQ=255)
          aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTa                                                                                          >  1:1223821‑M2/90‑101 (MQ=255)
              ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGaa                                                                                      <  2:449718‑M2/16‑1 (MQ=255)
                  ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATaaa                                                                                  <  2:821195‑M2/20‑1 (MQ=255)
                  ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATaaa                                                                                  <  1:609209‑M2/20‑1 (MQ=255)
                   gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATaaaa                                                                                 <  1:1453836‑M2/21‑1 (MQ=255)
                      agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAatca                                                                              <  2:1682495‑M2/24‑1 (MQ=255)
                         tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCt                                                                           >  1:1345112‑M2/75‑101 (MQ=255)
                         tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCt                                                                           >  1:1608770‑M2/75‑101 (MQ=255)
                         tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCt                                                                           <  1:1387593‑M2/27‑1 (MQ=255)
                         tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCt                                                                           >  1:75471‑M2/75‑101 (MQ=255)
                          gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCtg                                                                          <  1:690819‑M2/28‑1 (MQ=255)
                           atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCtgt                                                                         >  2:1442429‑M2/73‑101 (MQ=255)
                            tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCtgtg                                                                        >  1:179887‑M2/72‑101 (MQ=255)
                              gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCg                                                                      >  2:749022‑M2/70‑101 (MQ=255)
                               aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGa                                                                     <  2:1609197‑M2/33‑1 (MQ=255)
                               aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGa                                                                     >  2:557057‑M2/69‑101 (MQ=255)
                                 acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATa                                                                   <  1:77244‑M2/35‑1 (MQ=255)
                                      agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGAc                                                              <  1:1110405‑M2/40‑1 (MQ=255)
                                       gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACt                                                             <  1:997944‑M2/41‑1 (MQ=255)
                                            tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTc                                                        <  1:820006‑M2/46‑1 (MQ=255)
                                             ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCt                                                       >  1:116565‑M2/55‑101 (MQ=255)
                                             ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCt                                                       <  2:1705825‑M2/47‑1 (MQ=255)
                                              gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCtt                                                      >  2:1670485‑M2/54‑101 (MQ=255)
                                                 cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTa                                                   >  2:295778‑M2/51‑101 (MQ=255)
                                                  acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaa                                                  <  2:729259‑M2/52‑1 (MQ=255)
                                                  acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaa                                                  >  2:615444‑M2/50‑101 (MQ=255)
                                                   cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaat                                                 <  1:314608‑M2/53‑1 (MQ=255)
                                                   cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaat                                                 <  1:871360‑M2/53‑1 (MQ=255)
                                                   cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaat                                                 <  1:505496‑M2/53‑1 (MQ=255)
                                                    ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatg                                                <  1:1021649‑M2/54‑1 (MQ=255)
                                                    ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatg                                                >  2:1207552‑M2/48‑101 (MQ=255)
                                                       aaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatgaat                                             >  2:528925‑M2/45‑101 (MQ=255)
                                                       aaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatgaat                                             >  2:781027‑M2/45‑101 (MQ=255)
                                                       aaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatgaat                                             <  1:827391‑M2/57‑1 (MQ=255)
                                                        aaaacaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTaatgaatg                                            >  2:844151‑M2/44‑101 (MQ=255)
                                                         aaacaccatcatacactaaatcagtaactttgcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGNGCGATAACGACTAATTCTTTtaatgaatgn                                           <  1:273163‑M2/59‑2 (MQ=255)
                                                           acaccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGttt                                         <  1:1293965‑M2/61‑1 (MQ=255)
                                                             accatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGttttt                                       >  1:953250‑M2/39‑101 (MQ=255)
                                                              ccatcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTa                                      <  1:1202632‑M2/64‑1 (MQ=255)
                                                               catcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAt                                     <  1:738470‑M2/65‑1 (MQ=255)
                                                               catcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAt                                     <  2:746636‑M2/65‑1 (MQ=255)
                                                               catcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAt                                     <  1:528930‑M2/65‑1 (MQ=255)
                                                                 tcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTc                                   <  1:244027‑M2/67‑1 (MQ=255)
                                                                 tcatacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTc                                   >  2:1627274‑M2/35‑101 (MQ=255)
                                                                  catacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTcc                                  >  1:1637967‑M2/34‑101 (MQ=255)
                                                                  catacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTcc                                  <  1:1311858‑M2/68‑1 (MQ=255)
                                                                   atacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCt                                 <  1:943061‑M2/69‑1 (MQ=255)
                                                                   atacactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCt                                 >  2:54412‑M2/33‑101 (MQ=255)
                                                                     acactaaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGa                               >  1:939417‑M2/31‑101 (MQ=255)
                                                                         taaatcagtaagttggcagcatcaccGTTTTTTTGCTAATAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAc                           >  2:998169‑M2/27‑101 (MQ=255)
                                                                         taaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAc                           <  1:518951‑M2/75‑1 (MQ=255)
                                                                         taaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAc                           >  2:938718‑M2/27‑101 (MQ=255)
                                                                          aaatcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACt                          <  1:1450804‑M2/76‑1 (MQ=255)
                                                                            atcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGc                        <  1:1695464‑M2/78‑1 (MQ=255)
                                                                             tcagtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCt                       <  1:1305026‑M2/79‑1 (MQ=255)
                                                                               agtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTcc                     <  2:1036995‑M2/81‑1 (MQ=255)
                                                                                gtaagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTccc                    <  1:1146199‑M2/82‑1 (MQ=255)
                                                                                 taagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCa                   <  1:1447001‑M2/83‑1 (MQ=255)
                                                                                  aagttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCAt                  <  2:1440064‑M2/84‑1 (MQ=255)
                                                                                    gttggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATaa                <  1:1508138‑M2/86‑1 (MQ=255)
                                                                                      tggcagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACa              <  1:1157194‑M2/88‑1 (MQ=255)
                                                                                         cagcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGa           >  2:1650561‑M2/11‑101 (MQ=255)
                                                                                           gcatcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACa         <  1:392886‑M2/93‑1 (MQ=255)
                                                                                            catcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAg        <  2:1608764‑M2/94‑1 (MQ=255)
                                                                                            catcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAg        <  1:73957‑M2/94‑1 (MQ=255)
                                                                                            catcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAg        >  2:1557055‑M2/8‑101 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       >  2:635911‑M2/7‑101 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       >  2:1542519‑M2/7‑101 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       <  1:844156‑M2/95‑1 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       >  1:132173‑M2/7‑101 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       >  2:1417342‑M2/7‑101 (MQ=255)
                                                                                             atcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgg       >  1:1255881‑M2/7‑101 (MQ=255)
                                                                                              tcaccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAggg      <  2:944698‑M2/96‑1 (MQ=255)
                                                                                               caccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAgggg     >  2:49432‑M2/5‑101 (MQ=255)
                                                                                                 ccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAg   >  1:681505‑M2/3‑101 (MQ=255)
                                                                                                 ccGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAg   <  2:192208‑M2/99‑1 (MQ=255)
                                                                                                  cGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGc  >  1:681285‑M2/2‑101 (MQ=255)
                                                                                                   |                                                                                                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGC  >  71/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.