New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 222 | 1 = | 0 (0.000) | 78 (0.050) | 60/200 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 61 | = 24668 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 61/24569‑24668 | tgctgctgcAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACt < 1:1436497‑M2/101‑2 (MQ=255) tgctgcAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgta < 1:1632056‑M2/101‑5 (MQ=255) gTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcaccca < 2:722622‑M2/101‑14 (MQ=255) tAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccat > 1:871803‑M2/1‑87 (MQ=255) aTGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattt < 1:614612‑M2/101‑17 (MQ=255) aTGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattt < 1:1254409‑M2/101‑17 (MQ=255) gcgcTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttg > 2:106122‑M2/1‑83 (MQ=255) cgcTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgt < 2:1213234‑M2/101‑20 (MQ=255) cTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttg < 2:1439284‑M2/101‑22 (MQ=255) tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg > 2:955274‑M2/1‑79 (MQ=255) tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg > 2:1390082‑M2/1‑79 (MQ=255) tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg < 2:1705214‑M2/101‑23 (MQ=255) cGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggac > 2:64831‑M2/1‑77 (MQ=255) gCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgat > 2:1251219‑M2/1‑74 (MQ=255) aCCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatga > 1:1480271‑M2/1‑72 (MQ=255) cAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaa > 1:1642454‑M2/1‑70 (MQ=255) aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat > 1:96828‑M2/1‑69 (MQ=255) aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat < 1:178824‑M2/101‑33 (MQ=255) aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat > 1:297555‑M2/1‑69 (MQ=255) gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatg < 2:710219‑M2/101‑34 (MQ=255) gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatg < 1:1539348‑M2/101‑34 (MQ=255) cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaa < 1:174370‑M2/101‑37 (MQ=255) aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata > 1:1664288‑M2/1‑63 (MQ=255) aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata < 2:234589‑M2/101‑39 (MQ=255) aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata > 2:754360‑M2/1‑63 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:1229973‑M2/1‑57 (MQ=255) cccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 2:528736‑M2/1‑54 (MQ=255) ccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 2:1136179‑M2/1‑53 (MQ=255) cGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 2:45024‑M2/1‑52 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 1:1152054‑M2/101‑54 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:1582682‑M2/101‑54 (MQ=255) aaCAGGGTTATCGAACTGGGTCCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:555300‑M2/1‑47 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 1:1347596‑M2/1‑47 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 1:183581‑M2/101‑55 (MQ=255) aCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa > 1:424263‑M2/1‑46 (MQ=255) aCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGACAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa > 1:547065‑M2/1‑46 (MQ=255) aGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagc < 1:684766‑M2/101‑58 (MQ=255) ggTTATCGAACTGGGTGCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcca > 2:216436‑M2/1‑42 (MQ=255) ttATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa < 1:1467984‑M2/101‑62 (MQ=255) tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 1:343651‑M2/1‑39 (MQ=255) tAGCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 1:710224‑M2/1‑39 (MQ=255) aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat < 2:248899‑M2/101‑64 (MQ=255) aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 1:540252‑M2/1‑38 (MQ=255) aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaaa < 2:1298445‑M2/101‑64 (MQ=255) cGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 1:77300‑M2/101‑66 (MQ=255) cGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac > 1:93045‑M2/1‑36 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc < 1:1459673‑M2/101‑68 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc > 2:604499‑M2/1‑34 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc > 2:1436491‑M2/1‑34 (MQ=255) cTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 1:139289‑M2/101‑70 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaacccaaaatacccgtt < 2:495319‑M2/101‑71 (MQ=255) ggTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg < 1:323808‑M2/101‑73 (MQ=255) gTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 2:502227‑M2/101‑74 (MQ=255) gTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 2:673634‑M2/1‑28 (MQ=255) tACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa < 2:76320‑M2/101‑75 (MQ=255) aCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa > 1:430587‑M2/1‑26 (MQ=255) aCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:344199‑M2/101‑76 (MQ=255) tCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag > 1:410154‑M2/1‑24 (MQ=255) cAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc < 2:686427‑M2/101‑79 (MQ=255) cAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc < 2:611342‑M2/101‑79 (MQ=255) gTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc < 1:175558‑M2/101‑82 (MQ=255) gTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc < 2:932040‑M2/101‑82 (MQ=255) tCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct > 1:693104‑M2/1‑19 (MQ=255) cGAAATCTAACGCCAGAGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 1:585342‑M2/1‑18 (MQ=255) aaaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga < 2:331726‑M2/101‑86 (MQ=255) aaaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga < 1:1517692‑M2/101‑86 (MQ=255) aaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa < 2:1298690‑M2/101‑87 (MQ=255) aaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa > 2:1631908‑M2/1‑15 (MQ=255) aTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 2:1254404‑M2/1‑14 (MQ=255) cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 2:1477458‑M2/101‑90 (MQ=255) cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc > 2:631330‑M2/1‑12 (MQ=255) cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 2:864688‑M2/101‑90 (MQ=255) cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 1:826589‑M2/101‑90 (MQ=255) aCGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg > 1:123446‑M2/1‑9 (MQ=255) gCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa < 1:511106‑M2/101‑95 (MQ=255) tactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac < 1:163869‑M2/100‑99 (MQ=255) aCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact > 2:583860‑M2/1‑2 (MQ=255) aCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact > 2:171002‑M2/1‑2 (MQ=255) | TGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 61/24569‑24668 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |