New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 2 1 =0 (0.000)52 (0.930)
+TTAC
46/192 0.2 100% intergenic (–/–) –/– –/–
?77 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGAGCAT  >  77/1‑100
                                                                                                  |                                                                                                   
catgtagtacatggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttaccga                                                                                                   >  2:1218821‑M2/99‑101 (MQ=255)
 atgtagtacatggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttaccgac                                                                                                  >  2:774221‑M2/98‑101 (MQ=255)
        acatggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATa                                                                                           <  2:115893‑M2/11‑1 (MQ=255)
        acatggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATa                                                                                           <  1:1333608‑M2/11‑1 (MQ=255)
          atggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAgc                                                                                         >  2:1164442‑M2/89‑101 (MQ=255)
          atggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAgc                                                                                         >  2:966536‑M2/89‑101 (MQ=255)
           tggtgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAgcc                                                                                        <  2:240390‑M2/14‑1 (MQ=255)
              tgaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAgccgcc                                                                                     <  1:792162‑M2/17‑1 (MQ=255)
               gaatgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCa                                                                                    >  2:1145985‑M2/84‑101 (MQ=255)
                 atgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATa                                                                                  <  2:1398904‑M2/20‑1 (MQ=255)
                  tgcaccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATAc                                                                                 >  2:1238832‑M2/81‑101 (MQ=255)
                      ccgtccagacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCat                                                                             >  1:328433‑M2/77‑101 (MQ=255)
                             gacgcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACg                                                                      <  1:57941‑M2/32‑1 (MQ=255)
                                gcgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATa                                                                   <  1:369281‑M2/35‑1 (MQ=255)
                                 cgggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATAc                                                                  >  1:518004‑M2/66‑101 (MQ=255)
                                  gggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATAcc                                                                 >  2:1412371‑M2/65‑101 (MQ=255)
                                   ggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCg                                                                <  1:168591‑M2/38‑1 (MQ=255)
                                   ggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCg                                                                >  2:1477578‑M2/64‑101 (MQ=255)
                                   ggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCg                                                                >  2:27312‑M2/64‑101 (MQ=255)
                                   ggtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGACGCCATACCCATATAAACGATACCg                                                                >  2:165894‑M2/64‑101 (MQ=255)
                                    gtcgtttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCgg                                                               >  1:450798‑M2/63‑101 (MQ=255)
                                       gtttttctcatagcatgaagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGcgt                                                            <  1:1197588‑M2/42‑1 (MQ=255)
                                        tttttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGcgtc                                                           >  1:434939‑M2/59‑101 (MQ=255)
                                           ttctcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTg                                                        >  1:1379178‑M2/56‑101 (MQ=255)
                                              tcatagcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTgacc                                                     <  1:774226‑M2/49‑1 (MQ=255)
                                              taatagcatgtagaaagcagagaagacgggttagctttaaacagaccgttacCGCCCCCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTgacc                                                     <  1:1117899‑M2/49‑1 (MQ=255)
                                                  agcatgtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTgaccagac                                                 <  1:1164447‑M2/53‑1 (MQ=255)
                                                       gtagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGc                                            <  1:1565347‑M2/58‑1 (MQ=255)
                                                        tagaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCa                                           >  1:1318271‑M2/43‑101 (MQ=255)
                                                         agaaggcagaaaagtggggtaagctttaaccaggccgttgcCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCaa                                          <  1:1153675‑M2/60‑1 (MQ=255)
                                                         agaaagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCaa                                          >  1:1503081‑M2/42‑101 (MQ=255)
                                                            aagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCa                                       <  2:327626‑M2/63‑1 (MQ=255)
                                                            aagcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCa                                       >  1:17883‑M2/39‑101 (MQ=255)
                                                             agcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAGCGATACCGGCGTCGTGACCAGACCAGGCAACCag                                      <  1:1071480‑M2/64‑1 (MQ=255)
                                                             agcagagaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCag                                      >  2:782192‑M2/38‑101 (MQ=255)
                                                                agcgaatacgggttagctttaaacaggccgatacCGACCGCAATAGCCGCCATACCCATATAAACGATACCCACGTCGTGACCAGACCCGGGCACCAGAGc                                   >  2:868509‑M2/35‑101 (MQ=255)
                                                                agagtagatgagttagctttaaacaggccgttgcCGCCCGAAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGc                                   <  1:1320811‑M2/67‑1 (MQ=255)
                                                                  agaagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCAt                                 <  1:1218826‑M2/69‑1 (MQ=255)
                                                                    aagacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATaa                               >  1:717995‑M2/31‑101 (MQ=255)
                                                                     agacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAAc                              <  2:272770‑M2/72‑1 (MQ=255)
                                                                     agacgggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAAc                              >  2:948714‑M2/30‑101 (MQ=255)
                                                                          ggttagctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATc                         >  2:1535585‑M2/25‑101 (MQ=255)
                                                                           gttagctttaaacaggccgttacCGACCGCAGTAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCg                        <  1:184305‑M2/78‑1 (MQ=255)
                                                                               gctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAg                    <  2:239853‑M2/82‑1 (MQ=255)
                                                                                ctttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGc                   >  1:1269775‑M2/19‑101 (MQ=255)
                                                                                 tttaaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGca                  >  1:1290625‑M2/18‑101 (MQ=255)
                                                                                    aaacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACaa               >  2:586426‑M2/15‑101 (MQ=255)
                                                                                     aacaggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAAt              >  1:443424‑M2/14‑101 (MQ=255)
                                                                                      acaggccgttacCGCCCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATa             <  1:911696‑M2/89‑1 (MQ=255)
                                                                                       caggccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAg            >  1:1179599‑M2/12‑101 (MQ=255)
                                                                                          gccgttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAgcgc         >  1:682134‑M2/9‑101 (MQ=255)
                                                                                             gttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGa      >  1:92090‑M2/6‑101 (MQ=255)
                                                                                              ttacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGAg     <  2:1684686‑M2/97‑1 (MQ=255)
                                                                                               tacCGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGAGc    >  2:1561903‑M2/4‑101 (MQ=255)
                                                                                                 cCGACCGCAATAGCAGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGAGCAt  <  1:966541‑M2/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCGCAATAGCCGCCATACCCATATAAACGATACCGGCGTCGTGACCAGACCAGGCAACCAGAGCATAACCAATCGCCAGCACAATAGCGCCGAGCAT  >  77/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.