New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 186 1 =0 (0.000)69 (0.880)
+C
60/198 0.3 100% intergenic (–/–) –/– –/–
?42 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCA  >  42/1‑101
                                                                                                  |                                                                                                    
cagcgtggatgaagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCt                                                                                                    >  1:578777‑M2/99‑101 (MQ=255)
cagcgtggatgaagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCt                                                                                                    <  2:1582369‑M2/3‑1 (MQ=255)
   cgtggatgaagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTAt                                                                                                 <  2:1145774‑M2/6‑1 (MQ=255)
   cgtggatgaagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTAt                                                                                                 <  2:1232071‑M2/6‑1 (MQ=255)
          gaagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCt                                                                                          <  1:564111‑M2/13‑1 (MQ=255)
           aagtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTa                                                                                         >  2:1675444‑M2/88‑101 (MQ=255)
            agtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTAc                                                                                        <  1:236445‑M2/15‑1 (MQ=255)
            agtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTAc                                                                                        <  2:1502882‑M2/15‑1 (MQ=255)
             gtgctggaactgctggcaggtcgtaagtaatccaatcccgccctctccacaaggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACa                                                                                       <  2:570403‑M2/16‑1 (MQ=255)
             gtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACa                                                                                       <  2:714722‑M2/16‑1 (MQ=255)
             gtgctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACa                                                                                       <  2:434127‑M2/16‑1 (MQ=255)
               gctggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAgg                                                                                     <  2:728311‑M2/18‑1 (MQ=255)
                 tggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGAt                                                                                   >  1:810962‑M2/82‑101 (MQ=255)
                 tggaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGAt                                                                                   <  1:253228‑M2/20‑1 (MQ=255)
                   gaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGc                                                                                 >  1:559706‑M2/80‑101 (MQ=255)
                   gaactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGc                                                                                 >  1:625000‑M2/80‑101 (MQ=255)
                    aactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattggctgatgcgctacGCTTATCAGGCCTACAGGATGCa                                                                                >  2:369056‑M2/79‑101 (MQ=255)
                    aactgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCa                                                                                <  1:182418‑M2/23‑1 (MQ=255)
                      ctgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATc                                                                              >  2:1689657‑M2/77‑101 (MQ=255)
                       tgctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATca                                                                             <  1:781339‑M2/26‑1 (MQ=255)
                        gctggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATcac                                                                            <  2:54048‑M2/27‑1 (MQ=255)
                          tggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACaa                                                                          >  2:1469944‑M2/73‑101 (MQ=255)
                           ggcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAAt                                                                         <  1:1405257‑M2/30‑1 (MQ=255)
                            gcaggtcgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAAtt                                                                        >  1:260910‑M2/71‑101 (MQ=255)
                              aggtcgtaaataatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATttg                                                                      >  2:158578‑M2/69‑101 (MQ=255)
                                 tcggaagtaatccaatccccccctctccacatggagaaggtgggtttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATttgttg                                                                   <  2:355504‑M2/36‑1 (MQ=255)
                                  cgtaagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGa                                                                  >  2:1321181‑M2/65‑101 (MQ=255)
                                    taagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAt                                                                >  2:200348‑M2/63‑101 (MQ=255)
                                     aagtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAtt                                                               >  1:417522‑M2/62‑101 (MQ=255)
                                      agtaatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAttt                                                              <  2:624995‑M2/41‑1 (MQ=255)
                                       gtaatccaatcccacccgctccgcatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTg                                                             <  1:1564678‑M2/42‑1 (MQ=255)
                                        taatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGc                                                            >  1:260825‑M2/59‑101 (MQ=255)
                                         aatccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCa                                                           <  2:1312846‑M2/44‑1 (MQ=255)
                                          atccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCAc                                                          >  1:1365054‑M2/57‑101 (MQ=255)
                                           tccaatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACg                                                         <  1:134209‑M2/46‑1 (MQ=255)
                                             caatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGtt                                                       <  1:1302567‑M2/48‑1 (MQ=255)
                                             caatcccaccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGtt                                                       >  1:548365‑M2/54‑101 (MQ=255)
                                                tccccccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCtt                                                    <  2:429606‑M2/51‑1 (MQ=255)
                                                    cccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAg                                                <  2:836727‑M2/55‑1 (MQ=255)
                                                    accctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAg                                                >  2:348881‑M2/47‑101 (MQ=255)
                                                     ccctctccacatggagaaggtgggtttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAgg                                               <  2:790544‑M2/56‑1 (MQ=255)
                                                     ccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAgg                                               <  2:1028824‑M2/56‑1 (MQ=255)
                                                     ccctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAgg                                               >  1:632445‑M2/46‑101 (MQ=255)
                                                      cctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGc                                              <  1:107083‑M2/57‑1 (MQ=255)
                                                      cctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGc                                              >  1:1214492‑M2/45‑101 (MQ=255)
                                                      cctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGc                                              >  2:245421‑M2/45‑101 (MQ=255)
                                                      cctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGc                                              >  1:1648126‑M2/45‑101 (MQ=255)
                                                       ctctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGcc                                             >  1:827355‑M2/44‑101 (MQ=255)
                                                        tctccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCg                                            <  2:1571807‑M2/59‑1 (MQ=255)
                                                           ccacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGAt                                         <  1:603751‑M2/62‑1 (MQ=255)
                                                            cacatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATa                                        >  1:1075411‑M2/39‑101 (MQ=255)
                                                             acatggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATaa                                       >  1:677785‑M2/38‑101 (MQ=255)
                                                               atggagaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAgg                                     <  2:1524643‑M2/66‑1 (MQ=255)
                                                                   agaaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCt                                 >  2:343637‑M2/32‑101 (MQ=255)
                                                                     aaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTa                               >  2:1647875‑M2/30‑101 (MQ=255)
                                                                     aaggtggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTa                               <  1:1290258‑M2/72‑1 (MQ=255)
                                                                         tggggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgcc                           >  1:1462759‑M2/26‑101 (MQ=255)
                                                                           gggttaattgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgccgc                         >  1:213677‑M2/24‑101 (MQ=255)
                                                                                 attgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCgg                   >  1:42689‑M2/18‑101 (MQ=255)
                                                                                 attgcctgatgcgctacGCTTATCAGGCCTACAGGATACATCACAATTTGTTGAATTTGCCCGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCgg                   <  1:52426‑M2/84‑1 (MQ=255)
                                                                                  ttgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGgc                  <  1:723868‑M2/85‑1 (MQ=255)
                                                                                   tgcctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCggct                 >  1:269322‑M2/16‑100 (MQ=255)
                                                                                     cctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGACGGATAAGGCGCTTACGCCGCATCCGGCGCt               >  1:449292‑M2/14‑101 (MQ=255)
                                                                                      ctgatgcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTg              <  1:830467‑M2/89‑1 (MQ=255)
                                                                                           gcgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCct         <  2:1631574‑M2/94‑1 (MQ=255)
                                                                                            cgctacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCctc        >  1:1360323‑M2/7‑101 (MQ=255)
                                                                                               tacGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTctcc     >  1:76869‑M2/4‑101 (MQ=255)
                                                                                                acGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTctcct    >  2:1146664‑M2/3‑101 (MQ=255)
                                                                                                acGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTctcct    >  1:240488‑M2/3‑101 (MQ=255)
                                                                                                  gCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGACGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCa  >  1:381198/1‑101 (MQ=255)
                                                                                                  |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCA  >  42/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.