| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 178 | = 5286 | 51 (0.650) | 81 (1.310) | 58/172 | 0.0 | 78.7% | intergenic (–/–) | –/– | –/– |
| ? | 21 | 15 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGGTAAGATCATAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAGTTAATGT > 21/1‑115 | cggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcat > 2:178354‑M2/101‑101 (MQ=255)cggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcat < 2:1574896‑M2/1‑1 (MQ=255)cggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcat < 2:239787‑M2/1‑1 (MQ=255)cggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcat > 1:1351870‑M2/101‑101 (MQ=255) ggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatg < 2:335285‑M2/2‑2 (MQ=255) ggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatg < 2:1371493‑M2/2‑2 (MQ=255) gggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAg < 1:1087107‑M2/3‑1 (MQ=255) ggttttttgctggttgatactgtttttgtcatgtgaatcacctctgactgagagtttgctcacttagccgcgtgtccactattgctgggtaagatcatgac < 2:1062332‑M2/4‑4 (MQ=255) ggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgac < 2:1649746‑M2/4‑4 (MQ=255) ggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgac < 1:812754‑M2/4‑4 (MQ=255) ggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGa < 1:1601416‑M2/4‑1 (MQ=255) gttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGAt < 2:1668799‑M2/5‑1 (MQ=255) tttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcg > 1:1590239‑M2/95‑95 (MQ=255) tttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcg < 2:327480‑M2/7‑7 (MQ=255) tttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcg > 1:488130‑M2/95‑95 (MQ=255) tttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcg < 1:689476‑M2/7‑7 (MQ=255) tttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGc > 1:925492‑M2/95‑101 (MQ=255) ttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcgc > 1:499293‑M2/94‑94 (MQ=255) tttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcatgactcgct < 2:1469435‑M2/9‑9 (MQ=255) tttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTa < 1:1189045‑M2/9‑1 (MQ=255) tactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACg < 1:347800‑M2/11‑1 (MQ=255) actggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACgg > 1:1334126‑M2/90‑101 (MQ=255) tggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGat < 1:1682665‑M2/14‑1 (MQ=255) ttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatc < 2:216185‑M2/17‑1 (MQ=255) tgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatcc < 2:1691891‑M2/18‑1 (MQ=255) gatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatcca > 2:116617‑M2/83‑101 (MQ=255) atactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatccat > 2:1375912‑M2/82‑101 (MQ=255) tactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatccata > 2:1036583‑M2/81‑101 (MQ=255) actgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGatatccatat < 1:505399‑M2/22‑1 (MQ=255) gtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGAtatccatatcca > 2:10861‑M2/77‑101 (MQ=255) tttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGaa > 2:676546‑M2/74‑101 (MQ=255) tttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGAGGCTACGGATATCCATATCCAGaa > 2:801184‑M2/74‑101 (MQ=255) ttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgttgggtaagatcaTAGATGCTACGGATATCCATATCCAGAAc > 2:837591‑M2/73‑101 (MQ=255) ttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAAc < 1:127288‑M2/29‑1 (MQ=255) atgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAg > 1:315293‑M2/68‑101 (MQ=255) atgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAg > 1:946765‑M2/68‑101 (MQ=255) tgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGc > 2:1142764‑M2/67‑101 (MQ=255) gtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCa > 1:869153‑M2/66‑101 (MQ=255) gtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCa > 2:956723‑M2/66‑101 (MQ=255) gtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCa > 2:394157‑M2/66‑101 (MQ=255) gtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCAAATCCAGAACTTCAGCa > 1:166810‑M2/66‑101 (MQ=255) tgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCaa > 1:1165161‑M2/65‑101 (MQ=255) agtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATc < 1:448153‑M2/39‑1 (MQ=255) agtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATc > 1:1561366‑M2/63‑101 (MQ=255) tcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTg > 1:759593‑M2/61‑101 (MQ=255) tcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTg > 2:955294‑M2/61‑101 (MQ=255) acctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGat < 2:866305‑M2/43‑1 (MQ=255) acctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGat > 2:887193‑M2/59‑101 (MQ=255) cctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGata < 1:1668447‑M2/44‑1 (MQ=255) ctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATgg > 2:612878‑M2/55‑101 (MQ=255) gactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGAt > 2:1082132‑M2/53‑101 (MQ=255) actgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGAtt > 1:454085‑M2/52‑101 (MQ=255) actgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGAtt < 2:436114‑M2/50‑1 (MQ=255) ctgagagtttactcccttagccacgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATta > 2:133170‑M2/51‑101 (MQ=255) tgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATtat < 1:63139‑M2/52‑1 (MQ=255) gagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATtata < 2:925487‑M2/53‑1 (MQ=255) gagagtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATtata > 1:87456‑M2/49‑101 (MQ=255) gtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCa < 1:116617‑M2/57‑1 (MQ=255) gtttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCa > 2:76514‑M2/45‑101 (MQ=255) tttactcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATCTCCAGAACTTCAGCAATCTCATATGGATTATAACCAg < 2:765611‑M2/58‑1 (MQ=255) ttcctcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGa < 2:1708409‑M2/59‑1 (MQ=255) ctcacttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAAc > 1:53099‑M2/40‑101 (MQ=255) acttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCat < 2:1077670‑M2/65‑1 (MQ=255) acttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCat > 1:1385772‑M2/37‑101 (MQ=255) cttagccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCata < 1:453296‑M2/66‑1 (MQ=255) gccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATAcc < 1:1482533‑M2/70‑1 (MQ=255) ccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATAccc > 2:1432826‑M2/31‑101 (MQ=255) ccgcgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATAccc > 2:1379144‑M2/31‑101 (MQ=255) cgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCAt < 2:1159865‑M2/74‑1 (MQ=255) cgtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCAt < 2:1013768‑M2/74‑1 (MQ=255) gtgtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCAtt > 1:733174‑M2/27‑101 (MQ=255) gtccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTAt > 1:485671‑M2/25‑101 (MQ=255) ccactattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATgg < 2:861521‑M2/79‑1 (MQ=255) ccactattgctgggtaagatcaTAGATGCTACGGATATCCACATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATgg < 1:976505‑M2/79‑1 (MQ=255) actattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTg > 2:755497‑M2/21‑101 (MQ=255) actattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTg < 2:468611‑M2/81‑1 (MQ=255) ctattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGa > 1:5629‑M2/20‑101 (MQ=255) ctattgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGa > 2:291907‑M2/20‑101 (MQ=255) attgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAAt > 1:116962‑M2/18‑101 (MQ=255) attgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAAt < 1:1138521‑M2/84‑1 (MQ=255) tgctgggtaagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTc > 1:993484‑M2/16‑101 (MQ=255) aagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAg > 2:580586‑M2/8‑101 (MQ=255) aagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAg < 2:454080‑M2/94‑1 (MQ=255) aagatcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAg > 1:497618‑M2/8‑101 (MQ=255) tcaTAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAGTTaa > 2:1071676‑M2/4‑101 (MQ=255) tAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAGTTAAtgt < 1:887198/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGGTAAGATCATAGATGCTACGGATATCCATATCCAGAACTTCAGCAATCTGATATGGATTATAACCAGAAACCATATACCCCATTATGGTGAATTCCATCTGAGTTAATGT > 21/1‑115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |