New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 161 | = 999 | 76 (1.100) | 67 (1.180) | 52/166 | 0.0 | 68.0% | intergenic (–/–) | –/– | –/– |
? | 212 | 18 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGACATAGCAACCTCCAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGTTAT > 212/1‑118 | gagtgactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctcca < 1:1038202‑M2/1‑1 (MQ=255) gtgactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGt > 1:1594464‑M2/99‑101 (MQ=255) gtgactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGt > 1:1072466‑M2/99‑101 (MQ=255) tgactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTa > 1:991335‑M2/98‑101 (MQ=255) tgactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTa < 2:580829‑M2/4‑1 (MQ=255) gactggttcagatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTaa > 1:662524‑M2/97‑101 (MQ=255) agatgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGaataa > 2:291784‑M2/88‑101 (MQ=255) atgaaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccagttgacatagcaacctccAGTAAAATGAATAATg > 2:213194‑M2/86‑101 (MQ=255) aaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑c > 1:1670792‑M2/83‑101 (MQ=255) aaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑c > 1:1186017‑M2/83‑101 (MQ=255) aaaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑c > 1:171‑M2/83‑101 (MQ=255) aaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATCATGAT‑cc < 2:1034704‑M2/20‑1 (MQ=255) aaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑cc < 2:1714504‑M2/20‑1 (MQ=255) aaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑cc < 2:704823‑M2/20‑1 (MQ=255) aaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑cc < 1:892440‑M2/20‑1 (MQ=255) aaggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑cc < 1:795740‑M2/20‑1 (MQ=255) ggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑ccgt < 1:732806‑M2/22‑1 (MQ=255) ggaaaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑ccgt > 2:317773‑M2/80‑101 (MQ=255) aaccaccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑ccgtacc > 1:103748‑M2/77‑101 (MQ=255) caccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑ccgtaccgta > 2:1439206‑M2/74‑101 (MQ=255) ccgcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACa < 1:664153‑M2/30‑1 (MQ=255) gcaaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAAc > 2:1123061‑M2/70‑101 (MQ=255) caaaagcatccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACt > 1:1625787‑M2/69‑101 (MQ=255) atccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATa < 1:1099769‑M2/40‑1 (MQ=255) atccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATa > 1:992491‑M2/62‑101 (MQ=255) atccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATa > 2:489653‑M2/62‑101 (MQ=255) atccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATa > 2:110916‑M2/62‑101 (MQ=255) tccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATaa < 2:858074‑M2/41‑1 (MQ=255) ccggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAAt > 2:197294‑M2/60‑101 (MQ=255) cggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATAAATAATGAT‑CCGTACCGTACAACTGCGGATAAtg < 2:433345‑M2/43‑1 (MQ=255) ggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAAtgt < 1:1477196‑M2/44‑1 (MQ=255) ggcggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAAtgt > 1:390950‑M2/58‑101 (MQ=255) ggcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGAt > 2:224517‑M2/55‑101 (MQ=255) ggcaggccggccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGAt < 1:649420‑M2/47‑1 (MQ=255) gcaggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATa > 2:388615‑M2/54‑101 (MQ=255) aggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAg > 1:611010‑M2/52‑101 (MQ=255) aggccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGGAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAg > 1:1349906‑M2/52‑101 (MQ=255) ccgtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCgg > 2:1706435‑M2/49‑101 (MQ=255) gtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGga > 2:1205614‑M2/47‑101 (MQ=255) gtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGga > 1:839791‑M2/47‑101 (MQ=255) gtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGga > 1:850030‑M2/47‑101 (MQ=255) gtccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGga < 1:1517076‑M2/55‑1 (MQ=255) tccacttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGgac > 2:83042‑M2/46‑101 (MQ=255) cttccagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACt > 1:428657‑M2/42‑101 (MQ=255) cagtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAg < 2:103748‑M2/64‑1 (MQ=255) gtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGAc > 1:1359153‑M2/36‑101 (MQ=255) gtgtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGAc < 1:266884‑M2/66‑1 (MQ=255) gtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGt > 1:499844‑M2/34‑101 (MQ=255) gtgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGt > 2:1193458‑M2/34‑101 (MQ=255) tgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGtt > 2:894745‑M2/33‑101 (MQ=255) tgaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGtt > 2:1611992‑M2/33‑101 (MQ=255) gaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGtta < 1:282737‑M2/70‑1 (MQ=255) gaaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGtta > 1:985566‑M2/32‑101 (MQ=255) aaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGttat < 1:206002‑M2/71‑1 (MQ=255) aaacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGttat > 1:1042344‑M2/31‑101 (MQ=255) aacgtaatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGttatt < 2:1588420‑M2/72‑1 (MQ=255) gtaatccggttgacatagcaacctccAGTAAAAGGAATAATGAT‑CCGTACCGTACCACTGCGGATAATGTGATAAGCGGGACGGCTTCGGACGCTATTAgg > 2:1429258‑M2/27‑101 (MQ=255) taatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAggg < 2:1655091‑M2/76‑1 (MQ=255) aatccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGgga > 1:1107320‑M2/25‑101 (MQ=255) atccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaa < 1:1439212‑M2/78‑1 (MQ=255) atccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaa > 1:387254‑M2/24‑101 (MQ=255) atccggtggacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaa < 2:135550‑M2/78‑1 (MQ=255) tccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaag < 1:625517‑M2/79‑1 (MQ=255) ccggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaagg > 2:204289‑M2/22‑101 (MQ=255) cggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaagga > 1:1694426‑M2/21‑101 (MQ=255) ggttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGggaaggaa < 1:1161415‑M2/82‑1 (MQ=255) gttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAAc > 1:368916‑M2/19‑101 (MQ=255) ttgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACa < 2:508474‑M2/84‑1 (MQ=255) tgacatagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAg > 1:981369‑M2/17‑101 (MQ=255) tgacagagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAg > 2:1718470‑M2/17‑101 (MQ=255) catagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGaaa < 2:1364207‑M2/88‑1 (MQ=255) atagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGaaaa > 1:699844‑M2/13‑101 (MQ=255) tagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAATGAACAGAAAAt < 1:1665778‑M2/90‑1 (MQ=255) tagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAAt < 1:1193463‑M2/90‑1 (MQ=255) tagcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAAt < 2:1349900‑M2/90‑1 (MQ=255) aaacAACCCTCAATAAAAAGAAATATGATCCCTTCCCGTA‑AACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAAt < 2:285048/98‑1 (MQ=255) gcaacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGc > 1:425689‑M2/10‑101 (MQ=255) acagcctccAGTAAAATGAATTATGAT‑CCGTACCGTACAACTGCGCATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGc < 2:831760‑M2/92‑1 (MQ=255) aacctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTa < 2:201073‑M2/94‑1 (MQ=255) acctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTAt < 1:1123066‑M2/95‑1 (MQ=255) cctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATg < 2:42537‑M2/96‑1 (MQ=255) ctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATgg > 2:197578‑M2/5‑101 (MQ=255) ctccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATgg > 1:240069‑M2/5‑101 (MQ=255) ccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGtt > 1:1102603‑M2/3‑101 (MQ=255) ccAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGtt > 2:146097‑M2/3‑101 (MQ=255) cAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGTTa < 2:1648212‑M2/100‑1 (MQ=255) cAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGTTa > 2:1456109‑M2/2‑101 (MQ=255) aGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGTTAt < 2:1232323/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGACATAGCAACCTCCAGTAAAATGAATAATGAT‑CCGTACCGTACAACTGCGGATAATGTGATAAGCGGGACGACTTCAGACGTTATTAGGGAAGGAACAGAAAATGCTATGGTTAT > 212/1‑118 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |