New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 152 = 209736 (0.560)30 (0.500)
+GTCGTGCG
18/184 2.6 44.3% intergenic (–/–) –/– –/–
?81 19992 = 46 (0.700)intergenic (–/–) –/– –/–

TGCCGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGC‑‑‑‑‑‑‑‑  >  81/19892‑20057
                                                                                                    |                                                                         
agatgcctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgc                                                                           >  2:902009‑M2/101‑101 (MQ=255)
  ccGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCa                                                                         >  2:1229689/1‑101 (MQ=255)
    gcctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATg                                                                       >  2:757092‑M2/97‑101 (MQ=255)
     gTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGc                                                                      >  2:625562/1‑101 (MQ=255)
     gTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGc                                                                      <  2:1333001/101‑1 (MQ=255)
     cctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGc                                                                      >  1:479600‑M2/96‑101 (MQ=255)
     cctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGc                                                                      >  2:594164‑M2/96‑101 (MQ=255)
      tGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGcc                                                                     >  2:530093/1‑101 (MQ=255)
      ctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGcc                                                                     >  2:1162155‑M2/95‑101 (MQ=255)
      ctgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGcc                                                                     <  1:598672‑M2/7‑1 (MQ=255)
       tgatgcgacgctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagactggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCt                                                                    <  2:1445400‑M2/8‑1 (MQ=255)
          ttGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGAt                                                                 <  2:499429/101‑1 (MQ=255)
          ttGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGAt                                                                 <  1:632303/101‑1 (MQ=255)
          ttGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGAt                                                                 <  1:1168403/101‑1 (MQ=255)
          ttGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGAt                                                                 <  2:786318/101‑1 (MQ=255)
           tGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATg                                                                <  2:991912/101‑1 (MQ=255)
            gTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGc                                                               <  1:944/101‑1 (MQ=255)
            gTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGc                                                               <  2:750907/101‑1 (MQ=255)
             tCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCg                                                              <  1:573951/101‑1 (MQ=255)
                gctatgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACg                                                           <  1:1262346‑M2/17‑1 (MQ=255)
                  gcgTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCt                                                         >  2:709833/1‑101 (MQ=255)
                   atgcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCtt                                                        >  1:1558686‑M2/82‑101 (MQ=255)
                     gcgcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACgctttg                                                      <  1:178932‑M2/22‑3 (MQ=255)
                      gACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATc                                                     >  1:173859/1‑101 (MQ=255)
                       gcgtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGacgctttgcg                                                    <  2:1354558‑M2/24‑5 (MQ=255)
                         gtcttatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGcgcg                                                  >  2:634334‑M2/76‑101 (MQ=255)
                         ggttgatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGcgcg                                                  >  2:1223407‑M2/76‑101 (MQ=255)
                          aGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGt                                                 >  1:442358/1‑101 (MQ=255)
                          aGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGt                                                 >  1:1654698/1‑101 (MQ=255)
                             tatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCtt                                              <  1:1176291‑M2/30‑1 (MQ=255)
                             tatcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCtt                                              >  2:1598706‑M2/72‑101 (MQ=255)
                              gcTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTa                                             <  1:1568488/101‑1 (MQ=255)
                              atcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTa                                             <  1:251535‑M2/31‑1 (MQ=255)
                               tcaggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                                            <  1:1601585‑M2/32‑1 (MQ=255)
                               cTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTAt                                            <  1:1250773/101‑1 (MQ=255)
                                caggcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATc                                           >  1:895392‑M2/69‑101 (MQ=255)
                                   tGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAgg                                        >  1:1333929/1‑101 (MQ=255)
                                   gcctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAgg                                        >  1:394496‑M2/66‑101 (MQ=255)
                                     ctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGcc                                      >  1:1002885‑M2/64‑101 (MQ=255)
                                     ctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGcc                                      >  1:1294492‑M2/64‑101 (MQ=255)
                                     ctacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGcc                                      >  2:1710914‑M2/64‑101 (MQ=255)
                                     aCCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGcc                                      >  2:347177/1‑101 (MQ=255)
                                     aCCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGcc                                      >  1:383239/1‑101 (MQ=255)
                                      tacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCt                                     <  1:1161111‑M2/39‑1 (MQ=255)
                                      tacggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCt                                     <  1:418961‑M2/39‑1 (MQ=255)
                                       cGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTa                                    >  1:1309055/1‑101 (MQ=255)
                                        gATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTac                                   >  1:1471011/1‑101 (MQ=255)
                                         ggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCtacg                                  >  2:1079546‑M2/60‑100 (MQ=255)
                                         ggtttatgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCtacg                                  >  1:1240950‑M2/60‑100 (MQ=255)
                                         atatGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTaca                                  <  2:105582/101‑1 (MQ=255)
                                           atGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACg                                >  2:899350/1‑101 (MQ=255)
                                              tgGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTca                             >  2:229888/1‑101 (MQ=255)
                                               tgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATcaggcctacggtttac                            <  1:1305459‑M2/48‑8 (MQ=255)
                                               tgggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTATcaggcctacggtttac                            <  1:632131‑M2/48‑8 (MQ=255)
                                               gggAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTcac                            <  1:1361622/101‑1 (MQ=255)
                                                ggAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTcaca                           >  1:339195/1‑101 (MQ=255)
                                                 ggcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTTatcaggcctacggtttacgg                          >  1:624536‑M2/52‑92 (MQ=255)
                                                  gcgaagtgtagaccggataaggcgttcacgccgcatccggcagtcgtgcgCCATGCCTGATGCGACGCTTTGCGCGTCTtatcaggcctacggtttacggg                         <  1:634339‑M2/51‑11 (MQ=255)
                                                  aaaaCCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACg                         >  2:831764/1‑101 (MQ=255)
                                                       cTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGt                    >  1:973459/1‑101 (MQ=255)
                                                         gTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCg                  >  1:813086/1‑101 (MQ=255)
                                                          tttCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCgg                 <  1:773543/101‑1 (MQ=255)
                                                           ttCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGa                >  1:735540/1‑101 (MQ=255)
                                                           ttCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGa                >  1:629152/1‑101 (MQ=255)
                                                           ttCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGa                >  1:773225/1‑101 (MQ=255)
                                                                cagGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAgg           >  2:1069524/1‑101 (MQ=255)
                                                                 agGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGc          <  1:625567/101‑1 (MQ=255)
                                                                  ggCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcg         >  2:932709/1‑100 (MQ=255)
                                                                    cGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgtt       <  2:1719893/101‑4 (MQ=255)
                                                                     gTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttc      >  2:453370/1‑97 (MQ=255)
                                                                     gTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttc      <  2:629147/101‑5 (MQ=255)
                                                                     gTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttc      >  2:646539/1‑97 (MQ=255)
                                                                       cacaGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttcac    <  2:1302738/101‑7 (MQ=255)
                                                                       cacaGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttcac    <  1:1309074/101‑7 (MQ=255)
                                                                         cagcagTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttcacgc  <  1:9294/101‑9 (MQ=255)
                                                                         cagcagTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGcgttcacgc  >  1:1688039/1‑93 (MQ=255)
                                                                                                    |                                                                         
TGCCGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAAGTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATAAGGC‑‑‑‑‑‑‑‑  >  81/19892‑20057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.