| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 150 | = 3698 | 21 (0.340) | 49 (0.860) +TGGGTACCGGAGCG |
40/172 | 0.3 | 84.4% | intergenic (–/–) | –/– | –/– |
| ? | 73 | = 22246 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CGGAGTATGCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 73/22148‑22246 | cGGAGTATGCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcg > 2:887031‑M2/1‑99 (MQ=255) aGTATGCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctc < 1:1291943‑M2/101‑6 (MQ=255) tGCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTAcgggtccggt > 1:584498/1‑92 (MQ=255) gCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggta < 1:802892‑M2/101‑11 (MQ=255) gCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggta > 1:341134‑M2/1‑91 (MQ=255) ggcgTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccatt < 1:1087098‑M2/101‑17 (MQ=255) gcgTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattg > 2:1418833‑M2/1‑84 (MQ=255) gTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgta > 2:578331‑M2/1‑82 (MQ=255) aTGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggc > 1:957608‑M2/1‑79 (MQ=255) tgGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtactcctcgtaggcctg < 2:1530354‑M2/101‑26 (MQ=255) ggCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgat < 1:139323‑M2/101‑28 (MQ=255) ggCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgat > 2:1317584‑M2/1‑74 (MQ=255) cgcAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataa > 2:1339050‑M2/1‑72 (MQ=255) cgcAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataa < 2:1345678‑M2/101‑30 (MQ=255) ttCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaag < 2:418611‑M2/101‑41 (MQ=255) ttAAGCAGGCGCTCATTTGATTGCCGGATGCGGCGGAAACGCCTTATCCGGCTTACcgccccggtacccattgtaggcctgataagacgcgtcaagcgtcg < 2:1103578‑M2/101‑46 (MQ=255) aaGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgca < 1:590577‑M2/101‑48 (MQ=255) aaGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgca > 2:587142‑M2/1‑54 (MQ=255) gCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataggacgcgtcaagcgtcgcatc < 2:1103307‑M2/101‑50 (MQ=255) ggTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcagg < 1:1282731‑M2/101‑53 (MQ=255) ggTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcagg < 2:1255187‑M2/101‑53 (MQ=255) gTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggc < 1:63473‑M2/101‑54 (MQ=255) gTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggc < 1:312629‑M2/101‑54 (MQ=255) tGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggca < 1:552517‑M2/101‑55 (MQ=255) gCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcat < 2:1125001‑M2/101‑56 (MQ=255) cTCATTTGATTGACGGATGCGGCCTAACCGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatg > 2:478733‑M2/1‑45 (MQ=255) cATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggg < 2:396770‑M2/101‑59 (MQ=255) tttGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgc < 2:1020435‑M2/101‑61 (MQ=255) tttGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgc < 2:124742‑M2/101‑61 (MQ=255) catgaCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggact > 1:1292228‑M2/3‑41 (MQ=255) atgACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggactt < 2:912833‑M2/100‑62 (MQ=255) atgACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggactt < 2:350565‑M2/100‑62 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggactta < 1:463826‑M2/101‑63 (MQ=255) gATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcacc < 1:1447924‑M2/101‑64 (MQ=255) actgcCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagc > 2:630403‑M2/3‑37 (MQ=255) ctgCCGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcg > 2:377375‑M2/2‑36 (MQ=255) gCCGGATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgatt < 2:321732‑M2/101‑68 (MQ=255) cGGATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagctgtat > 2:548517‑M2/1‑32 (MQ=255) ggATGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgcc < 1:542420‑M2/101‑71 (MQ=255) ggATGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtatt < 1:272695‑M2/101‑71 (MQ=255) aTGCGGCGTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccgg < 2:619622‑M2/101‑73 (MQ=255) tGCGGCGTAAGCGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgct > 1:1706172‑M2/1‑28 (MQ=255) tGCGGCGTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgct < 2:672936‑M2/101‑74 (MQ=255) gcggcgTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggat > 2:868001‑M2/1‑27 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACattcgttctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttca < 2:444388‑M2/101‑77 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttca < 2:835178‑M2/101‑77 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttca > 1:54462‑M2/1‑25 (MQ=255) gcgTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgct > 2:1234010‑M2/1‑24 (MQ=255) cgTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctc < 1:892215‑M2/101‑79 (MQ=255) cgTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctc < 1:1251355‑M2/101‑79 (MQ=255) gTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctct < 1:1626028‑M2/101‑80 (MQ=255) gTAAACGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctct < 2:1259813‑M2/101‑80 (MQ=255) tAAACGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcac < 2:1553968‑M2/101‑81 (MQ=255) aaaCGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcacc < 2:200703‑M2/101‑82 (MQ=255) aaCGCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcat < 1:1359584‑M2/101‑83 (MQ=255) aCGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgc < 1:708338‑M2/101‑84 (MQ=255) cGCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgca > 2:1660470‑M2/1‑17 (MQ=255) gCCTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcac < 1:969059‑M2/101‑86 (MQ=255) gCCTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcac > 1:1616453‑M2/1‑16 (MQ=255) ccTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcact > 2:760945‑M2/1‑15 (MQ=255) ccTTATCCGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcacg < 2:1411579‑M2/101‑87 (MQ=255) cTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcacta < 1:1349847‑M2/101‑88 (MQ=255) cTTATCCGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcacta < 2:542012‑M2/101‑88 (MQ=255) ccGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcg > 1:286888‑M2/1‑9 (MQ=255) ccGGCCTACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcacgacccag < 2:709119‑M2/101‑93 (MQ=255) cGGCTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcga > 1:1125006‑M2/1‑8 (MQ=255) cTTACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaat > 1:1345684‑M2/1‑5 (MQ=255) ctaCattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcacgacccagcgtca < 2:300635‑M2/100‑98 (MQ=255) tACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatac > 1:1316968‑M2/1‑3 (MQ=255) tACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatac < 2:1489208‑M2/101‑99 (MQ=255) tACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatac > 1:1020440‑M2/1‑3 (MQ=255) tACcgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatac > 1:1448957‑M2/1‑3 (MQ=255) tACattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcacgacccagagtcag < 1:1018370‑M2/101‑99 (MQ=255) aCattcgtgctcccgtaggcctgataagacgcgtcagcgtcgcatcaggcagcgcacggacttagcggtattgcttcagcaccgcacgacccagcgtcagg < 2:1437320‑M2/101‑100 (MQ=255) ccgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatacag > 1:993349‑M2/1‑1 (MQ=255) ccgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatacag < 2:363507‑M2/101‑101 (MQ=255) ccgctccggtacccattgtaggcctgataagacgcgtcaagcgtcgcatcaggcatggtgcaccgattgccggatgctctcatcactacagcgaaatacag > 2:79622‑M2/1‑1 (MQ=255) | CGGAGTATGCCAGCGGCGTGATGTGGGCGCAGAGTAAGTTCAGTTAAGCAGGTGCTCATTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 73/22148‑22246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |