New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 149 = 98950 (0.000)28 (0.500)
+GACGCGTCAG
24/180 1.9 100% intergenic (–/–) –/– –/–
?49 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA  >  49/1‑56
                                                                                                  |                                                       
tgcgccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGt                                                       <  2:751692‑M2/3‑1 (MQ=255)
  cgccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCg                                                     <  2:371301‑M2/5‑1 (MQ=255)
   gccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGc                                                    >  2:1062408‑M2/96‑101 (MQ=255)
     cggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCAt                                                  >  1:1630404‑M2/94‑101 (MQ=255)
      ggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATc                                                 <  2:1567468‑M2/9‑1 (MQ=255)
         gctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAgg                                              <  2:1528531‑M2/12‑1 (MQ=255)
          ctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGc                                             >  2:201886‑M2/89‑101 (MQ=255)
          ctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGc                                             >  2:801400‑M2/89‑101 (MQ=255)
           tgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCa                                            <  2:1512491‑M2/14‑1 (MQ=255)
           tgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCa                                            >  2:639093‑M2/88‑101 (MQ=255)
            gcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCAt                                           <  2:1704327‑M2/15‑1 (MQ=255)
            gcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCAt                                           >  1:1242528‑M2/87‑101 (MQ=255)
              atgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCg                                         <  2:1643272‑M2/17‑1 (MQ=255)
                         tataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATaaccg                              <  2:154647‑M2/28‑3 (MQ=255)
                               gaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGAt                        <  1:1227039‑M2/34‑1 (MQ=255)
                                aagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGatg                       >  1:1277026‑M2/67‑100 (MQ=255)
                                aagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGatg                       >  2:409750‑M2/67‑100 (MQ=255)
                                 agtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGgatgc                      <  1:1282804‑M2/36‑3 (MQ=255)
                                 agtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGgatgc                      >  1:578741‑M2/66‑99 (MQ=255)
                                  gtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCg                     <  1:67759‑M2/37‑1 (MQ=255)
                                       ggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTg                >  2:1047378‑M2/60‑101 (MQ=255)
                                        gatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGa               >  1:1220593‑M2/59‑101 (MQ=255)
                                          tgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAAc             >  2:1410672‑M2/57‑101 (MQ=255)
                                            agctggagttgaagattaggggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGc           <  2:935097‑M2/47‑1 (MQ=255)
                                             gctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGcc          <  1:1047383‑M2/48‑1 (MQ=255)
                                              ctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCt         >  2:1510025‑M2/53‑101 (MQ=255)
                                                    ttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCg   >  1:109896‑M2/47‑101 (MQ=255)
                                                     tgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCcgg  >  2:391037‑M2/46‑100 (MQ=255)
                                                                                                  |                                                       
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA  >  49/1‑56

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.