New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 115 = 962777 (1.130)31 (0.460) 25/200 2.6 44.6% intergenic (–/–) –/– –/–
?12 = 53253 0 (0.000)intergenic (–/–) –/– –/–

CGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  12/53153‑53253
                                                                                                    |                                                                             
cGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGttt                                                                               <  1:97207/101‑1 (MQ=255)
  ccGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtg                                                                             <  2:1430357‑M2/101‑3 (MQ=255)
   cGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgt                                                                            <  2:1618153‑M2/101‑4 (MQ=255)
   cGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgt                                                                            <  1:1218670‑M2/101‑4 (MQ=255)
    gTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgta                                                                           <  2:666902‑M2/101‑5 (MQ=255)
    gTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgta                                                                           <  1:513865‑M2/101‑5 (MQ=255)
     tAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtag                                                                          >  2:528844‑M2/1‑96 (MQ=255)
      aGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtagg                                                                         >  2:1041102‑M2/1‑95 (MQ=255)
            ggATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggat                                                                   >  1:1296397‑M2/1‑89 (MQ=255)
             gATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCTGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggata                                                                  >  2:1085300‑M2/1‑88 (MQ=255)
             gATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggata                                                                  >  2:1694‑M2/1‑88 (MQ=255)
              aTTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataa                                                                 >  2:1208691‑M2/1‑87 (MQ=255)
               ttCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataag                                                                >  2:248417‑M2/1‑86 (MQ=255)
               ttCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataag                                                                <  2:1343819‑M2/101‑16 (MQ=255)
                 cACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggc                                                              <  2:991929‑M2/101‑18 (MQ=255)
                 cACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggc                                                              <  1:187814‑M2/101‑18 (MQ=255)
                   cTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgt                                                            <  2:555492‑M2/101‑20 (MQ=255)
                    tGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgtt                                                           <  2:955810‑M2/101‑21 (MQ=255)
                     gAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttc                                                          <  2:819519‑M2/101‑22 (MQ=255)
                      aaaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttca                                                         <  2:1340006‑M2/101‑23 (MQ=255)
                      aaaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttca                                                         >  2:1087172‑M2/1‑79 (MQ=255)
                       aaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcac                                                        <  1:1191286‑M2/101‑24 (MQ=255)
                          aCGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgcc                                                     >  2:955720‑M2/1‑75 (MQ=255)
                          aCGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgcc                                                     >  2:1475901‑M2/1‑75 (MQ=255)
                                gTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatcc                                               >  2:925015‑M2/1‑69 (MQ=255)
                                  aaGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccgg                                             >  1:407900‑M2/1‑67 (MQ=255)
                                   aGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggc                                            <  1:265374‑M2/101‑36 (MQ=255)
                                     aaaTGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaa                                          >  1:555497‑M2/1‑64 (MQ=255)
                                     aaaTGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaa                                          <  1:599306‑M2/101‑38 (MQ=255)
                                                                           acaTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgtttta    <  1:53733‑M2/101‑76 (MQ=255)
                                                                           acaTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgtttta    <  2:957254‑M2/101‑76 (MQ=255)
                                                                             aTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatc  <  2:547717‑M2/101‑78 (MQ=255)
                                                                                                    |                                                                             
CGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  12/53153‑53253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.