New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 115 | = 9627 | 77 (1.130) | 31 (0.460) | 25/200 | 2.6 | 44.6% | intergenic (–/–) | –/– | –/– |
? | 12 | = 53253 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 12/53153‑53253 | cGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGttt < 1:97207/101‑1 (MQ=255) ccGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtg < 2:1430357‑M2/101‑3 (MQ=255) cGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgt < 2:1618153‑M2/101‑4 (MQ=255) cGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgt < 1:1218670‑M2/101‑4 (MQ=255) gTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgta < 2:666902‑M2/101‑5 (MQ=255) gTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgta < 1:513865‑M2/101‑5 (MQ=255) tAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtag > 2:528844‑M2/1‑96 (MQ=255) aGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtagg > 2:1041102‑M2/1‑95 (MQ=255) ggATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggat > 1:1296397‑M2/1‑89 (MQ=255) gATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCTGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggata > 2:1085300‑M2/1‑88 (MQ=255) gATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggata > 2:1694‑M2/1‑88 (MQ=255) aTTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataa > 2:1208691‑M2/1‑87 (MQ=255) ttCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataag > 2:248417‑M2/1‑86 (MQ=255) ttCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataag < 2:1343819‑M2/101‑16 (MQ=255) cACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggc < 2:991929‑M2/101‑18 (MQ=255) cACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggc < 1:187814‑M2/101‑18 (MQ=255) cTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgt < 2:555492‑M2/101‑20 (MQ=255) tGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgtt < 2:955810‑M2/101‑21 (MQ=255) gAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttc < 2:819519‑M2/101‑22 (MQ=255) aaaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttca < 2:1340006‑M2/101‑23 (MQ=255) aaaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttca > 2:1087172‑M2/1‑79 (MQ=255) aaTACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcac < 1:1191286‑M2/101‑24 (MQ=255) aCGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgcc > 2:955720‑M2/1‑75 (MQ=255) aCGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgcc > 2:1475901‑M2/1‑75 (MQ=255) gTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatcc > 2:925015‑M2/1‑69 (MQ=255) aaGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccgg > 1:407900‑M2/1‑67 (MQ=255) aGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggc < 1:265374‑M2/101‑36 (MQ=255) aaaTGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaa > 1:555497‑M2/1‑64 (MQ=255) aaaTGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaa < 1:599306‑M2/101‑38 (MQ=255) acaTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgtttta < 1:53733‑M2/101‑76 (MQ=255) acaTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgtttta < 2:957254‑M2/101‑76 (MQ=255) aTAACATCATGATCTGTGTGGTTTtgtaggccggataaggcgttcacgccgcatccggcaacaggagccaaatgccggatgcaacgctggcgcgttttatc < 2:547717‑M2/101‑78 (MQ=255) | CGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGATGTGAATGTGGTCCGCATTCGGTCATAAACGCACATAACATCATGATCTGTGTGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 12/53153‑53253 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |