| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 112 | 3 = | 0 (0.000) | 39 (0.650) +CC |
33/196 | 1.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 123 | = 14064 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CCCTCGGCGACGCGCGAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 123/13965‑14064 | cccTCGGCGACGCGCGAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCg < 2:411692‑M2/101‑2 (MQ=255) ccTCGGCGACGCGCGAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCgg < 2:872683‑M2/101‑3 (MQ=255) cGGCGACGCGCGAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcag > 1:1367959‑M2/1‑96 (MQ=255) cgcgcgAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgata > 1:95676‑M2/1‑90 (MQ=255) gcgcgAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatac > 2:153661‑M2/1‑89 (MQ=255) cgcgAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgataca < 2:408184‑M2/101‑14 (MQ=255) caacCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttc < 2:304544‑M2/101‑23 (MQ=255) acCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcat > 2:338650‑M2/1‑77 (MQ=255) acCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcat < 2:1125723‑M2/101‑25 (MQ=255) cATCGCTCTTCGTCATGTGCCATTTTTCAGCTTTGTACTGTGGCGCGCCGTACGGCCAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatca > 1:881885‑M2/1‑75 (MQ=255) cATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatca > 2:620891‑M2/1‑75 (MQ=255) tCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaac < 1:1186035‑M2/101‑29 (MQ=255) gCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaacca < 2:1209995‑M2/101‑31 (MQ=255) gTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaa > 2:296278‑M2/1‑64 (MQ=255) cATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagc < 1:1221344‑M2/101‑40 (MQ=255) aTGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagcc < 2:1291799‑M2/101‑41 (MQ=255) aTGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagcc < 1:1413506‑M2/101‑41 (MQ=255) ccTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttc < 1:959420‑M2/101‑47 (MQ=255) cTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttca > 1:698713‑M2/1‑54 (MQ=255) cTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttca < 2:1419873‑M2/101‑48 (MQ=255) cTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGAAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttca > 1:250155‑M2/1‑54 (MQ=255) tttttCAGCATTGTACTGTGGCGCGCCGTCCGGACAAGCCATGTGGCAGTAGCggcatccgatacaaacatcttcatcaaccaccacaaagccatcttcac > 1:408189‑M2/1‑53 (MQ=255) cAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgctta < 2:556034‑M2/101‑54 (MQ=255) aGCATTGTCCGGTGGGGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttat > 1:1458550‑M2/1‑47 (MQ=255) aGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttat < 2:1105830‑M2/101‑55 (MQ=255) cATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgc > 2:1421507‑M2/1‑45 (MQ=255) ttGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcat < 1:1178606‑M2/101‑59 (MQ=255) gTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattg < 1:890362‑M2/101‑61 (MQ=255) tgGCGCGCCGTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgc < 2:94000‑M2/101‑67 (MQ=255) gTACGGACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcaga < 2:1097230‑M2/101‑76 (MQ=255) ggACAAGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttt > 1:1125728‑M2/1‑22 (MQ=255) aaGCCATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgta < 1:1611666‑M2/101‑84 (MQ=255) aaGCCATGCGGCAGTAGCggcagccgagacaaacatcttcatccaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgta < 2:759120‑M2/101‑84 (MQ=255) ccATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacat > 1:1419879‑M2/1‑15 (MQ=255) cATGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatg < 1:1373147‑M2/101‑88 (MQ=255) aTGTGGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgc < 2:1128682‑M2/101‑89 (MQ=255) tgtgGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgcg > 2:1514613‑M2/1‑12 (MQ=255) tgtgGCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgcg > 1:556039‑M2/1‑12 (MQ=255) ggCAGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgcgggg < 2:174104‑M2/101‑93 (MQ=255) aGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgcggggtca < 2:1110929‑M2/101‑96 (MQ=255) aGTAGCggcagccgatacaaacatcttcatcaaccaccacaaagccatcttcacgcttatgcattgcgccgctggggcagacttttgtacatgcggggtca < 1:1554667‑M2/101‑96 (MQ=255) | CCCTCGGCGACGCGCGAATAACAACCATCGCACTTCGTCATGTGCCCTTTTTCAGCATTGTACTGTGGCGCGCCGTACGGACAAGCCATGTGGCAGTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 123/13965‑14064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |