New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 11 | = 51864 | 71 (1.120) | 79 (1.420) | 59/170 | 0.0 | 72.4% | intergenic (–/–) | –/– | –/– |
? | 141 | = 11375 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CCTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTCTAAATAATT > 141/11275‑11390 | cctgcAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTc > 1:1658302/1‑101 (MQ=255) cTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCa < 1:1103405‑M2/101‑2 (MQ=255) cTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTATAGAGCACGCAATTTTTCa < 2:546839‑M2/101‑2 (MQ=255) aGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatact < 1:1099787‑M2/101‑6 (MQ=255) aGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatact < 2:442604‑M2/101‑6 (MQ=255) gTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactc < 2:490206‑M2/101‑7 (MQ=255) aGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactcta < 2:1672516‑M2/101‑9 (MQ=255) gCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaa > 1:267396‑M2/1‑92 (MQ=255) cGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaa < 1:3548‑M2/101‑11 (MQ=255) aTGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaata < 2:923043‑M2/101‑13 (MQ=255) tGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataa < 1:27286‑M2/101‑14 (MQ=255) tCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattc > 2:502014‑M2/1‑85 (MQ=255) tCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattc > 2:179159‑M2/1‑85 (MQ=255) aaGAGCGGGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactagaaataattcgag > 2:287994‑M2/1‑82 (MQ=255) aaGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgag < 1:1004280‑M2/101‑20 (MQ=255) gagCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagtt > 1:1460610‑M2/1‑80 (MQ=255) agCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttg > 2:1457155‑M2/1‑79 (MQ=255) cgcgcTAAGAAGTAAAAAATCACAGGGCAGGGATACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgca > 1:425822‑M2/1‑77 (MQ=255) cgcgcTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgca > 2:1506826‑M2/1‑77 (MQ=255) gcgcTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcag > 2:1184758‑M2/1‑76 (MQ=255) cgcTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcagg > 2:1612109‑M2/1‑75 (MQ=255) cTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaa < 2:673667‑M2/101‑29 (MQ=255) tAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaag < 1:630563‑M2/101‑30 (MQ=255) agaagTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggc < 1:361837‑M2/101‑32 (MQ=255) aagTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCACCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcga < 2:512416‑M2/101‑34 (MQ=255) aaaaaTCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaaga > 2:627631‑M2/1‑63 (MQ=255) aaaaTCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagag < 1:1700130‑M2/101‑40 (MQ=255) aaaTCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagaga > 2:650655‑M2/1‑61 (MQ=255) aTCACAGGGCAGGGAAACCTGCGCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagt > 1:433477‑M2/1‑59 (MQ=255) aTCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagt > 1:106945‑M2/1‑59 (MQ=255) aTCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagt < 1:1194701‑M2/101‑43 (MQ=255) tCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtg < 1:810173‑M2/101‑44 (MQ=255) tCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTGTTAGAGCACGCAATTTTTCatcctctaaataattcgagttgcaggaaggcgacaagagagtg > 1:424000‑M2/1‑58 (MQ=255) cacaGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtga < 1:70938‑M2/101‑45 (MQ=255) acaGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaa > 1:1412806‑M2/1‑56 (MQ=255) acaGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaa > 2:1007575‑M2/1‑56 (MQ=255) acaGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaa > 2:835017‑M2/1‑56 (MQ=255) cagggcagggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaat < 1:335613‑M2/101‑47 (MQ=255) agggcagggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatc > 1:1072024‑M2/1‑54 (MQ=255) ggcagggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccc > 2:92829‑M2/1‑52 (MQ=255) gcagggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatcccc < 1:251972‑M2/101‑51 (MQ=255) cagggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatcccca > 2:754359‑M2/1‑50 (MQ=255) agggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccag < 2:1415607‑M2/101‑53 (MQ=255) ggAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccagga < 2:623720‑M2/101‑55 (MQ=255) aaaCCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagc < 2:318911‑M2/101‑57 (MQ=255) aaaCCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagc > 2:397940‑M2/1‑45 (MQ=255) ccTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagctta < 1:797181‑M2/101‑60 (MQ=255) ccTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagctta > 2:154838‑M2/1‑42 (MQ=255) cTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttac < 2:1280889‑M2/101‑61 (MQ=255) tGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttaca < 2:640867‑M2/101‑62 (MQ=255) tGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttaca < 2:1553123‑M2/101‑62 (MQ=255) gCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacat < 1:613264‑M2/101‑63 (MQ=255) gCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacat > 2:70938‑M2/1‑39 (MQ=255) gCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacat > 2:1000223‑M2/1‑39 (MQ=255) cccTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacata < 1:1529733‑M2/101‑64 (MQ=255) cccTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacata > 2:522410‑M2/1‑38 (MQ=255) cTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatcaccaggagcttacataag < 2:1399434‑M2/101‑66 (MQ=255) gTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaa > 2:1194696‑M2/1‑33 (MQ=255) gTTTCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaa > 1:1241748‑M2/1‑33 (MQ=255) tttCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaag > 2:749708‑M2/1‑32 (MQ=255) tttCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaag > 2:1498813‑M2/1‑32 (MQ=255) ttCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagt > 2:970149‑M2/1‑31 (MQ=255) ttCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagt < 1:1254418‑M2/101‑71 (MQ=255) tCAGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgatttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtg > 2:211602‑M2/1‑30 (MQ=255) aGCGCGCTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgac < 2:1650862‑M2/101‑74 (MQ=255) gcgcgcTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgact < 2:1309343‑M2/101‑75 (MQ=255) gcgcTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactgg < 1:1603691‑M2/101‑77 (MQ=255) cTTTTAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggt < 2:1436016‑M2/101‑80 (MQ=255) tttAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtga > 2:1658296‑M2/1‑20 (MQ=255) ttAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgag > 1:398804‑M2/1‑19 (MQ=255) ttAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgag > 2:27286‑M2/1‑19 (MQ=255) ttAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgag > 2:797176‑M2/1‑19 (MQ=255) tAGAGCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagc < 2:1346424‑M2/101‑84 (MQ=255) gCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaac > 2:1505822‑M2/1‑14 (MQ=255) gCACGCAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaac > 2:361837‑M2/1‑14 (MQ=255) cAATTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaccgcaga > 2:419586‑M2/1‑9 (MQ=255) aaTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagac > 1:546844‑M2/1‑8 (MQ=255) aaTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagac > 1:623725‑M2/1‑8 (MQ=255) aaTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagac > 1:476234‑M2/1‑8 (MQ=255) aaTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagac < 1:1552679‑M2/101‑94 (MQ=255) aaTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagaaagtgactggggtgagcgaacgcagac > 1:29940‑M2/1‑8 (MQ=255) aTTTTTCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacg > 1:490211‑M2/1‑7 (MQ=255) ttttCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgca > 1:1110264‑M2/1‑5 (MQ=255) ttCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagc < 1:675330‑M2/101‑99 (MQ=255) tCatactctaaatnattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagca < 2:381600‑M2/101‑100 (MQ=255) tCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagca < 2:1293479‑M2/101‑100 (MQ=255) tCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagca > 1:659523‑M2/1‑2 (MQ=255) tCatactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagca < 1:155779‑M2/101‑100 (MQ=255) catactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcac > 2:597700‑M2/1‑1 (MQ=255) catactctaaataattcgagttgcaggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcac > 2:1603685‑M2/1‑1 (MQ=255) | CCTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAAAAAATCACAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCGCTTTTAGAGCACGCAATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTCTAAATAATT > 141/11275‑11390 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |