| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 108 | 1 = | 0 (0.000) | 61 (0.910) +CCTGC |
45/190 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 11 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT > 11/1‑98 | cgctcacagccaatgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTAcc < 1:222653‑M2/7‑1 (MQ=255) cagccaatgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCatcatc < 1:498572‑M2/13‑1 (MQ=255) ccaatgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctccCAGTACCATCATCTGc > 2:1546825‑M2/86‑101 (MQ=255) caatgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCa > 1:1334765‑M2/85‑101 (MQ=255) caatgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCa > 2:494692‑M2/85‑101 (MQ=255) atgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGa > 1:672428‑M2/83‑101 (MQ=255) atgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccgccggtaatgcgcctgcCAGTACCATCATCTGCAGa > 2:443013‑M2/83‑101 (MQ=255) tgacgctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGAt < 1:65798‑M2/20‑1 (MQ=255) gctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTc > 1:1682486‑M2/78‑101 (MQ=255) ctgtaccagtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCg < 2:757680‑M2/25‑1 (MQ=255) agtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCa < 2:1219976‑M2/32‑1 (MQ=255) gtacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCaa > 2:205888‑M2/69‑101 (MQ=255) gtacgggtgtagacattaaaccggctggcaataatgattccggagaaagccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCaa > 1:1616805‑M2/69‑101 (MQ=255) tacgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCaaa < 1:377718‑M2/34‑1 (MQ=255) acgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAAt > 2:1359760‑M2/67‑101 (MQ=255) cgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATg < 1:1076848‑M2/36‑1 (MQ=255) cgggtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATg > 2:939998‑M2/66‑101 (MQ=255) gtgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAAtgaaa < 1:325897‑M2/39‑3 (MQ=255) tgtagacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAt < 2:965113‑M2/40‑1 (MQ=255) tgtagacattaaaccggctggcaataatgattccggagaaagccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAt < 2:1616799‑M2/40‑1 (MQ=255) tgtaaacataaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAt < 2:289586‑M2/40‑1 (MQ=255) agacattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGcc > 1:1046569‑M2/59‑101 (MQ=255) acattaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAAAGACATGCCAt < 1:494697‑M2/45‑1 (MQ=255) attaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTTAAATGACATGCCATAc > 1:1559121‑M2/55‑101 (MQ=255) attaaaccggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATAc > 2:233111‑M2/55‑101 (MQ=255) attaaaccggctggcaataatgattccggagaatgccggcggtaacgggcctgcCAGTACCATCATCTGCAGATGGTGGCTGCTCCAATGACATGCCATAc > 2:12046‑M2/55‑101 (MQ=255) accggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACg > 1:869429‑M2/50‑101 (MQ=255) cggctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGaa < 1:180383‑M2/54‑1 (MQ=255) ggcgggaaataatgtggcaggagagtcccggcggcaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGaaa < 1:192745‑M2/55‑1 (MQ=255) gctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGCACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGaaaa < 2:1693078‑M2/56‑1 (MQ=255) ctggcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAg < 2:1011598‑M2/57‑1 (MQ=255) gcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAg > 2:251301‑M2/42‑101 (MQ=255) gcaataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAg < 2:1376646‑M2/60‑1 (MQ=255) aataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTg > 1:1697261‑M2/40‑101 (MQ=255) aataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTg > 1:638199‑M2/40‑101 (MQ=255) aataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTg > 2:1696166‑M2/40‑101 (MQ=255) ataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGc < 1:1380830‑M2/63‑1 (MQ=255) ataatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGc < 2:473686‑M2/63‑1 (MQ=255) taatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAgtgac > 2:639239‑M2/38‑99 (MQ=255) aatgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCa > 2:283316‑M2/37‑101 (MQ=255) atgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAg < 2:1647‑M2/66‑1 (MQ=255) atgattccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAg < 2:1037012‑M2/66‑1 (MQ=255) attccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTgg > 1:724789‑M2/33‑101 (MQ=255) attccggagaacgccggcggtaacgcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTgg < 2:1029642‑M2/69‑1 (MQ=255) ccggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCAt < 1:6408‑M2/72‑1 (MQ=255) ggagaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCa > 1:450200‑M2/28‑101 (MQ=255) agaatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGa > 1:788059‑M2/26‑101 (MQ=255) aatgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAAt < 2:144538‑M2/78‑1 (MQ=255) atgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATc > 2:1283487‑M2/23‑101 (MQ=255) tgccggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCa < 1:956570‑M2/80‑1 (MQ=255) tgccggcggtaatgcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCa < 1:804334‑M2/80‑1 (MQ=255) tccagcagtaatgcacctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGACATCCCAAAGAAAAGCAGTGCCAGTGGCATCAGAATCAg < 2:185387‑M2/81‑1 (MQ=255) cggcggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCt < 2:672423‑M2/83‑1 (MQ=255) gcggtaatgcgcctgcCAGTACCACCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTc < 2:1261408‑M2/85‑1 (MQ=255) gggtaatgcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCa < 1:1224607‑M2/86‑1 (MQ=255) ctgaaatgcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCa < 2:1258261‑M2/86‑1 (MQ=255) cggtaatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCa < 2:919007‑M2/86‑1 (MQ=255) taatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGa < 1:90013‑M2/89‑1 (MQ=255) taatgcgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGa > 1:496490‑M2/13‑101 (MQ=255) tgcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAgg < 2:125854‑M2/92‑1 (MQ=255) gcccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGCAAGgt < 1:1300944‑M2/93‑1 (MQ=255) cgcctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGgtg > 1:1405646‑M2/8‑101 (MQ=255) ccctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGgtgt < 1:283316‑M2/95‑1 (MQ=255) ctgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTta > 1:1173722‑M2/5‑101 (MQ=255) tgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTtat < 2:574369‑M2/98‑1 (MQ=255) tgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTtat < 2:1682480‑M2/98‑1 (MQ=255) tgcCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTtat < 1:205888‑M2/98‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT > 11/1‑98 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |