New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 100 | = 12820 | 18 (0.300) | 29 (0.630) +TGTCAAATGTAGGCCGGATAAGGCGTTTACGC |
22/136 | 1.1 | 82.6% | intergenic (–/–) | –/– | –/– |
? | 29 | = 35867 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GGAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 29/35769‑35867 | ggAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgc < 2:1667792‑M2/101‑3 (MQ=255) gAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcg > 1:174843‑M2/1‑98 (MQ=255) gCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGGTTTTATGCCGGATGCGgcgta < 2:98505‑M2/101‑6 (MQ=255) cTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaa < 2:473715‑M2/101‑7 (MQ=255) cTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaa < 1:1287173‑M2/101‑7 (MQ=255) gcgcTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggtctacatttg > 1:547450‑M2/1‑72 (MQ=255) gcTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgac > 1:248503‑M2/1‑70 (MQ=255) cTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgaca < 2:322196‑M2/101‑33 (MQ=255) cGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttg < 1:969158‑M2/101‑40 (MQ=255) gATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgt > 1:988212‑M2/1‑61 (MQ=255) aTAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgta > 1:115042‑M2/1‑60 (MQ=255) tAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtag > 2:1631279‑M2/1‑59 (MQ=255) aTCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggc < 1:1695677‑M2/101‑45 (MQ=255) nagaggGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgacttatccggcctacatttgacagccgttgtaggcct < 1:626036‑M2/100‑47 (MQ=255) cAGAGGGTCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcct > 1:473720‑M2/1‑55 (MQ=255) agagGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctg > 1:51451‑M2/1‑54 (MQ=255) agagGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctg > 2:47572‑M2/1‑54 (MQ=255) gggCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataa < 1:1299268‑M2/101‑52 (MQ=255) cTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagac > 2:1316130‑M2/1‑47 (MQ=255) tttCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacg > 1:250263‑M2/1‑46 (MQ=255) tCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcg > 2:974368‑M2/1‑44 (MQ=255) ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa < 2:754439‑M2/101‑61 (MQ=255) ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa < 2:1168271‑M2/101‑61 (MQ=255) ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa < 1:1693900‑M2/101‑61 (MQ=255) cccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaag < 2:289578‑M2/101‑62 (MQ=255) cTTTCAGATAATGACAACCTGTTTTTATGCCGGATGAGgcgtaaacgccttatccggcctaaatttgacagccgttgtaggactgataagacgcgcaagcg < 1:1360569‑M2/101‑64 (MQ=255) ttCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtc > 2:20713‑M2/1‑36 (MQ=255) cAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgccgc < 1:1126065‑M2/101‑68 (MQ=255) aGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgca < 1:1688537‑M2/101‑69 (MQ=255) gATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcat < 1:165193‑M2/101‑70 (MQ=255) aTAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatc < 1:1079913‑M2/101‑71 (MQ=255) aTAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatc < 1:1538366‑M2/101‑71 (MQ=255) aaTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcag < 2:299091‑M2/101‑73 (MQ=255) aTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcagg < 2:383366‑M2/101‑74 (MQ=255) aTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcagg < 1:1210027‑M2/101‑74 (MQ=255) aaCCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcaggcgttg < 1:1142531‑M2/101‑79 (MQ=255) aaCCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcaggcgttg > 1:1379322‑M2/1‑23 (MQ=255) | GGAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 29/35769‑35867 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |