New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 100 = 1282018 (0.300)29 (0.630)
+TGTCAAATGTAGGCCGGATAAGGCGTTTACGC
22/136 1.1 82.6% intergenic (–/–) –/– –/–
?29 = 35867 0 (0.000)intergenic (–/–) –/– –/–

GGAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  29/35769‑35867
                                                                                                  |                                                                              
ggAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgc                                                                              <  2:1667792‑M2/101‑3 (MQ=255)
 gAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcg                                                                             >  1:174843‑M2/1‑98 (MQ=255)
   gCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGGTTTTATGCCGGATGCGgcgta                                                                           <  2:98505‑M2/101‑6 (MQ=255)
    cTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaa                                                                          <  2:473715‑M2/101‑7 (MQ=255)
    cTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaa                                                                          <  1:1287173‑M2/101‑7 (MQ=255)
                           gcgcTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggtctacatttg                                                   >  1:547450‑M2/1‑72 (MQ=255)
                             gcTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgac                                                 >  1:248503‑M2/1‑70 (MQ=255)
                              cTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgaca                                                <  2:322196‑M2/101‑33 (MQ=255)
                                     cGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttg                                         <  1:969158‑M2/101‑40 (MQ=255)
                                      gATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgt                                        >  1:988212‑M2/1‑61 (MQ=255)
                                       aTAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgta                                       >  1:115042‑M2/1‑60 (MQ=255)
                                        tAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtag                                      >  2:1631279‑M2/1‑59 (MQ=255)
                                          aTCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggc                                    <  1:1695677‑M2/101‑45 (MQ=255)
                                            nagaggGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgacttatccggcctacatttgacagccgttgtaggcct                                  <  1:626036‑M2/100‑47 (MQ=255)
                                            cAGAGGGTCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcct                                  >  1:473720‑M2/1‑55 (MQ=255)
                                             agagGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctg                                 >  1:51451‑M2/1‑54 (MQ=255)
                                             agagGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctg                                 >  2:47572‑M2/1‑54 (MQ=255)
                                                 gggCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataa                             <  1:1299268‑M2/101‑52 (MQ=255)
                                                    cTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagac                          >  2:1316130‑M2/1‑47 (MQ=255)
                                                     tttCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacg                         >  1:250263‑M2/1‑46 (MQ=255)
                                                       tCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcg                       >  2:974368‑M2/1‑44 (MQ=255)
                                                          ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa                    <  2:754439‑M2/101‑61 (MQ=255)
                                                          ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa                    <  2:1168271‑M2/101‑61 (MQ=255)
                                                          ccccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaa                    <  1:1693900‑M2/101‑61 (MQ=255)
                                                           cccTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaag                   <  2:289578‑M2/101‑62 (MQ=255)
                                                             cTTTCAGATAATGACAACCTGTTTTTATGCCGGATGAGgcgtaaacgccttatccggcctaaatttgacagccgttgtaggactgataagacgcgcaagcg                 <  1:1360569‑M2/101‑64 (MQ=255)
                                                               ttCAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtc               >  2:20713‑M2/1‑36 (MQ=255)
                                                                 cAGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgccgc             <  1:1126065‑M2/101‑68 (MQ=255)
                                                                  aGATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgca            <  1:1688537‑M2/101‑69 (MQ=255)
                                                                   gATAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcat           <  1:165193‑M2/101‑70 (MQ=255)
                                                                    aTAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatc          <  1:1079913‑M2/101‑71 (MQ=255)
                                                                    aTAATGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatc          <  1:1538366‑M2/101‑71 (MQ=255)
                                                                      aaTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcag        <  2:299091‑M2/101‑73 (MQ=255)
                                                                       aTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcagg       <  2:383366‑M2/101‑74 (MQ=255)
                                                                       aTGACAACCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcagg       <  1:1210027‑M2/101‑74 (MQ=255)
                                                                            aaCCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcaggcgttg  <  1:1142531‑M2/101‑79 (MQ=255)
                                                                            aaCCTGTTTTTATGCCGGATGCGgcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataagacgcgcaagcgtcgcatcaggcgttg  >  1:1379322‑M2/1‑23 (MQ=255)
                                                                                                  |                                                                              
GGAGCTCAGCGGTAGCCAGGCAATAGCGCGCTAAACCCGATAATCAGAGGGGCTTTCGCCCCTTTCAGATAATGACAACCTGTTTTTATGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  29/35769‑35867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.