| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 100 | 12778 = | 39 (0.660) | 19 (0.460) +TCTGCGCACCACCGCCGGATGCGGCGTAAAC |
14/138 | 2.5 | 58.5% | intergenic (–/–) | –/– | –/– |
| ? | 168 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCG > 168/1‑96 | cagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGtct > 2:18383‑M2/76‑101 (MQ=255)cagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGtct < 2:238550‑M2/26‑1 (MQ=255) ttgtaggcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTcc > 1:318107‑M2/71‑101 (MQ=255) aggcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCa < 2:128033‑M2/35‑1 (MQ=255) ggcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCaa < 2:1101373‑M2/36‑1 (MQ=255) gcatgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAat > 2:1135161‑M2/65‑101 (MQ=255) catgataagacgcgtcagcggcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAata < 1:1106314‑M2/38‑1 (MQ=255) ctgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAatat < 2:1415544‑M2/39‑1 (MQ=255) tgataagacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATc < 2:1055831‑M2/40‑1 (MQ=255) agacgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATccgccg < 1:889739‑M2/45‑1 (MQ=255) acgcgtcagcgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCcgcg < 2:1441813‑M2/47‑1 (MQ=255) cgtcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAAtatccgccgcgcggagcaac > 1:605399‑M2/46‑94 (MQ=255) tcgcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCaaaaaa < 2:973119‑M2/58‑1 (MQ=255) gcatcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATg > 1:201488‑M2/42‑101 (MQ=255) atcaggcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGAt > 2:166812‑M2/40‑101 (MQ=255) atcaggcatctgcgcaccaccgccggatgcggcatcaacGCCTTATCCGTCCTAAAAAATCGTCTCTTCCCTCAATATCCGCCTCGCGCCCAAAAAATGAt > 2:1423399‑M2/40‑101 (MQ=255) gcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGc < 1:420896‑M2/67‑1 (MQ=255) gcatctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGc < 2:1461873‑M2/67‑1 (MQ=255) atctgcgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCa > 2:1368664‑M2/33‑101 (MQ=255) cgcaccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAg < 1:1298735‑M2/74‑1 (MQ=255) caccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGt > 1:17579‑M2/26‑101 (MQ=255) caccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGt > 1:610734‑M2/26‑101 (MQ=255) caccaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGt < 1:55183‑M2/76‑1 (MQ=255) accaccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGtt < 1:1135166‑M2/77‑1 (MQ=255) caccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTGTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCa < 1:1224387‑M2/79‑1 (MQ=255) caccgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTtcg < 2:1594768‑M2/79‑2 (MQ=255) accgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAg < 1:134398‑M2/80‑1 (MQ=255) accgccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAg < 1:87826‑M2/80‑1 (MQ=255) gccggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTa < 2:1431829‑M2/83‑1 (MQ=255) cggatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAAc > 1:700716‑M2/17‑101 (MQ=255) gatgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCGTGCCAGAAAGGTTCAGCTAACCg > 1:938554‑M2/15‑101 (MQ=255) atgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGa < 1:1127896‑M2/88‑1 (MQ=255) tgcggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGAc > 1:1358411‑M2/13‑101 (MQ=255) ggcgtaaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTa < 1:100148‑M2/92‑1 (MQ=255) taaacGCCTTATCCGTCCTACAAAATCGTCTCTTCCTCCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCg > 2:816114‑M2/6‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCG > 168/1‑96 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |