New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 17 = | 65 (0.950) | 58 (0.850) | 30/188 | 1.9 | 65.5% | intergenic (–/–) | –/– | –/– |
? | 206 | = 4092 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACGCC > 206/3993‑4098 | aaGTGCAGCGTCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAa > 2:1021213‑M2/1‑100 (MQ=255) aGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaa > 2:1383365‑M2/1‑99 (MQ=255) gTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaac > 1:702909‑M2/1‑98 (MQ=255) cAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgcc < 2:1544291‑M2/101‑7 (MQ=255) gCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgcctt > 1:1029483‑M2/1‑93 (MQ=255) gCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgcctt > 2:888752‑M2/1‑93 (MQ=255) cGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgcctta > 2:1174238‑M2/1‑92 (MQ=255) ggCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttat > 1:1061528‑M2/1‑91 (MQ=255) cATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatcc > 1:1612224‑M2/1‑89 (MQ=255) aTCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccg < 2:345623‑M2/101‑14 (MQ=255) aTCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAATGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccg < 2:292707‑M2/101‑14 (MQ=255) cGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggc > 2:1699292‑M2/1‑86 (MQ=255) ggCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcc < 1:763391‑M2/101‑17 (MQ=255) gCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggact > 1:1427495‑M2/1‑84 (MQ=255) ggCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaa > 2:420692‑M2/1‑79 (MQ=255) cagcagCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaatt > 1:599800‑M2/1‑77 (MQ=255) cagcagCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaatt > 1:16961‑M2/1‑77 (MQ=255) agcagcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattc < 1:219004‑M2/101‑26 (MQ=255) cagcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattctt > 2:1145388‑M2/1‑74 (MQ=255) agcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttc > 2:500401‑M2/1‑73 (MQ=255) agcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttc < 2:1566224‑M2/101‑29 (MQ=255) gcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttcc > 1:1405250‑M2/1‑72 (MQ=255) gcCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttcc > 1:821315‑M2/1‑72 (MQ=255) ccTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccn > 1:445473‑M2/1‑71 (MQ=255) ccTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttcca < 1:1653623‑M2/101‑31 (MQ=255) cTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaa > 2:697411‑M2/1‑70 (MQ=255) ttGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattc < 2:68352‑M2/101‑36 (MQ=255) tGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattca < 2:1624557‑M2/101‑37 (MQ=255) tGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattca < 2:1301034‑M2/101‑37 (MQ=255) aaaCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatcctgcctacaaattcttccaaattcaat > 2:761075‑M2/1‑63 (MQ=255) aaaCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaat > 1:46231‑M2/1‑63 (MQ=255) aaaCGTTTTCCGGCGCTTCTCAAGGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaat < 2:1295883‑M2/101‑39 (MQ=255) aaCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaata < 1:1098136‑M2/101‑40 (MQ=255) aaCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaata < 1:497051‑M2/101‑40 (MQ=255) aCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatat > 2:939540‑M2/1‑61 (MQ=255) gTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatat > 1:866520‑M2/1‑59 (MQ=255) gTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatat > 2:1165844‑M2/1‑59 (MQ=255) ttttCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatatt > 1:207560‑M2/1‑58 (MQ=255) tttCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattg > 1:1535898‑M2/1‑57 (MQ=255) tCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgca > 1:615482‑M2/1‑55 (MQ=255) tCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgca < 1:965732‑M2/101‑47 (MQ=255) tCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgca > 2:477041‑M2/1‑55 (MQ=255) cGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcaga > 1:419071‑M2/1‑53 (MQ=255) ggCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaa > 2:843257‑M2/1‑52 (MQ=255) ggCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaa > 2:1255445‑M2/1‑52 (MQ=255) gCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaa > 1:557077‑M2/1‑51 (MQ=255) cGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaat > 2:1219392‑M2/1‑50 (MQ=255) ttCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcat > 1:292707‑M2/1‑47 (MQ=255) gAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgata < 2:1149401‑M2/101‑67 (MQ=255) aCAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataag > 2:299729‑M2/1‑33 (MQ=255) aCAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataag > 1:1225853‑M2/1‑33 (MQ=255) cAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagc < 2:806778‑M2/101‑70 (MQ=255) cAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagc < 2:836239‑M2/101‑70 (MQ=255) cAGTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagc > 1:841106‑M2/1‑32 (MQ=255) gTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgt > 2:1557445‑M2/1‑30 (MQ=255) gTGCGCTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgt < 1:1231506‑M2/101‑72 (MQ=255) gcTTTGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgtagcg > 1:1298920‑M2/1‑26 (MQ=255) tttGTTTATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgtagcgca < 2:1449415‑M2/101‑78 (MQ=255) tttATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatatttcagaaatcatgtaggcctgataagcgtagcgcatcag > 2:542938‑M2/1‑20 (MQ=255) tATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgtagcgcatcaggc > 2:618609‑M2/1‑18 (MQ=255) tATGCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgtagcgcatcaggc < 1:981747‑M2/101‑84 (MQ=255) gCCAGATGCGGCGTAaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtaggcctgataagcgtagcgcatcaggcaat < 2:875025‑M2/101‑87 (MQ=255) | AAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATGCGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACGCC > 206/3993‑4098 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |