| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 10 | 1 = | 0 (0.000) | 49 (0.760) | 36/194 | 1.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 21 | = 41890 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CTTTAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGC > 21/41791‑41893 | cTTTAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAt < 1:627446‑M2/101‑2 (MQ=255)cTTTAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAt > 2:1217520‑M2/1‑100 (MQ=255) tttAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtg > 2:1615058‑M2/1‑99 (MQ=255) tttAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtc < 2:1308808‑M2/101‑3 (MQ=255) tAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgcc > 1:780255‑M2/1‑97 (MQ=255) cGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccgga > 1:844666‑M2/1‑94 (MQ=255) cGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccgga < 2:1017752‑M2/101‑8 (MQ=255) ggCTGATGTGATATTCTGTATGCCGTTTTTACGGTTATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggat > 2:1552472‑M2/1‑93 (MQ=255) cTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgc > 2:1620608‑M2/1‑91 (MQ=255) gATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcgg < 1:78358‑M2/101‑13 (MQ=255) gATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcgg < 1:1515819‑M2/101‑13 (MQ=255) atatTCTGTATGCCGTTTTTACGGATATGACAGGGGGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaa < 1:1025280‑M2/101‑19 (MQ=255) ttCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgc < 2:996300‑M2/101‑22 (MQ=255) tCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcc < 1:970524‑M2/101‑23 (MQ=255) cTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcct < 2:798909‑M2/101‑24 (MQ=255) cTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcct < 1:1464560‑M2/101‑24 (MQ=255) tGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcctt < 1:248541‑M2/101‑25 (MQ=255) gTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcctta > 1:888069‑M2/1‑76 (MQ=255) gTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgcctta > 2:346897‑M2/1‑76 (MQ=255) tATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttat > 1:1299015‑M2/1‑75 (MQ=255) aTGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatc < 2:902333‑M2/101‑28 (MQ=255) aTGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatc > 1:1358362‑M2/1‑74 (MQ=255) aTGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatc > 2:627441‑M2/1‑74 (MQ=255) ccGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccgg > 1:1270842‑M2/1‑71 (MQ=255) cGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggc < 1:1620829‑M2/101‑32 (MQ=255) gTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGGGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcc < 2:1406439‑M2/101‑33 (MQ=255) ttttACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggccta < 2:228817‑M2/101‑35 (MQ=255) ttttACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggccta > 2:264350‑M2/1‑67 (MQ=255) ttACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctaca > 1:1277773‑M2/1‑65 (MQ=255) tACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggaggcggcgtgaacaacttatccggcctacaa < 2:162264‑M2/101‑38 (MQ=255) ggATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatc < 1:225094‑M2/101‑41 (MQ=255) ggATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggccgacaaatc < 2:593322‑M2/101‑41 (MQ=255) gATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatca > 1:1159668‑M2/1‑60 (MQ=255) atatGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcat < 2:605048‑M2/101‑43 (MQ=255) atatGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcat > 1:996305‑M2/1‑59 (MQ=255) tatGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatg > 1:49401‑M2/1‑58 (MQ=255) gACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttattccgcctacaaatcatgcaa < 1:325367‑M2/101‑47 (MQ=255) gACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaa < 1:736170‑M2/101‑47 (MQ=255) cAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaat > 2:433331‑M2/1‑53 (MQ=255) cAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaat > 1:1027116‑M2/1‑53 (MQ=255) aGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatc < 1:940310‑M2/101‑50 (MQ=255) gTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaa < 1:1633705‑M2/101‑53 (MQ=255) aGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaat < 2:128847‑M2/101‑56 (MQ=255) gggTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatat > 2:324269‑M2/1‑44 (MQ=255) gggTAACCTCACATCATGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatat > 1:1485425‑M2/1‑44 (MQ=255) ggTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatatt > 1:119318‑M2/1‑43 (MQ=255) ggTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatatt < 1:106314‑M2/101‑59 (MQ=255) gTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatattg < 1:1048701‑M2/101‑60 (MQ=255) aaCCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatattgca > 2:129682‑M2/1‑40 (MQ=255) aaCCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatattgca < 2:1034619‑M2/101‑62 (MQ=255) aCCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgccgcgtggacgccttatccggcctacaaatcatgcaactcccaaatattgcag < 2:1692756‑M2/101‑63 (MQ=255) aTCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatattgcaggagttat < 1:421176‑M2/101‑70 (MQ=255) aTCCTGATTATTGACTAAGTGCGCGTTGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaatcatgcaaatccaaaatattgcaggagttat > 2:123092‑M2/1‑32 (MQ=255) | CTTTAGCGGCTGATGTGATATTCTGTATGCCGTTTTTACGGATATGACAGGGTGAGGGGTAACCTCACATCCTGATTATTGACTAAGTGCGCGTTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGC > 21/41791‑41893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |