New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 91 1 =0 (0.000)22 (0.410) 21/174 2.5 35.5% intergenic (–/–) –/– –/–
?91 8339 = 80 (1.500)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTCGCCT  >  91/1‑101
                                                                             |                                                                                                    
ggcgtgaacgccttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGttt                                                                               >  2:1611459‑M1/78‑101 (MQ=255)
   gtgaacgccttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGaa                                                                            <  2:1645326‑M1/27‑1 (MQ=255)
     gaacgccttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAAc                                                                          >  1:324494‑M1/73‑101 (MQ=255)
          ccttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGttt                                                                     >  2:189464‑M1/68‑101 (MQ=255)
           cttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTg                                                                    >  1:1180602‑M1/67‑101 (MQ=255)
            ttatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGt                                                                   <  1:902774‑M1/36‑1 (MQ=255)
             tatccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTc                                                                  >  2:992977‑M1/65‑101 (MQ=255)
              atccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCt                                                                 >  2:566251‑M1/64‑101 (MQ=255)
              atccggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCt                                                                 <  2:1414235‑M1/38‑1 (MQ=255)
                 cggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGtt                                                              <  1:1374982‑M1/41‑1 (MQ=255)
                 cggcctacaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGtt                                                              >  2:776357‑M1/61‑101 (MQ=255)
                       acaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGc                                                        <  2:1029146‑M1/47‑1 (MQ=255)
                        caaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGcc                                                       >  1:1001395‑M1/54‑101 (MQ=255)
                                                             taggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAAc                  <  1:1240293‑M1/85‑1 (MQ=255)
                                                              aggcctgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACt                 <  1:926477‑M1/86‑1 (MQ=255)
                                                                   tgataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTaaaa            <  2:1096048‑M1/91‑1 (MQ=255)
                                                                     ataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAAtt          <  1:156605‑M1/93‑1 (MQ=255)
                                                                     ataagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAAtt          >  1:1657590‑M1/9‑101 (MQ=255)
                                                                      taagcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTa         >  2:577633‑M1/8‑101 (MQ=255)
                                                                         gcgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTc      >  2:1148345‑M1/5‑101 (MQ=255)
                                                                          cgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTCg     <  2:370603‑M1/98‑1 (MQ=255)
                                                                          cgtAGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTCg     <  2:1050208‑M1/98‑1 (MQ=255)
                                                                             AGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTCGCCt  >  1:914994‑M1/1‑101 (MQ=255)
                                                                             |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCATCAGGCAATTTAGCGTTTGAAACTGTTTGTCTGTTCCTTGCCGGATGCGACGTAAACGCCCCATCCGGCATAGCGAAACTTAAAATTACTCGCCT  >  91/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.