New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 9 35670 =122 (1.730)63 (1.240)
+CCAGTGCGAGCAATATCAACGTGGTTTT
52/144 0.0 42.0% intergenic (–/–) –/– –/–
?9 = 35756 120 (1.700)intergenic (–/–) –/– –/–

Only 100 of 316 total aligned reads displayed.

AGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAAT  >  9/35570‑35770
                                                                                                    |                                                                                                    
gacgcgctagcttcaggtgttagtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgtg                                                                                                      <  2:901234‑M1/2‑1 (MQ=255)
     tggCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAg                                                                                                 <  2:467783/101‑1 (MQ=255)
     gctagcttcaggtgttagtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAg                                                                                                 >  1:901239‑M1/95‑101 (MQ=255)
     gctagcttcaggtgttagtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAg                                                                                                 >  2:762122‑M1/95‑101 (MQ=255)
     agacgcgctagcttcaggtgttagtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAg                                                                                                 <  1:1190008‑M1/6‑1 (MQ=255)
       tagcttcaggtgttagtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAaggg                                                                                               <  1:801521‑M1/9‑2 (MQ=255)
       acgcgctagcttcaggtgttagtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGt                                                                                               >  1:41785‑M1/94‑101 (MQ=255)
       acgcgctagcttcaggtgttagtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGt                                                                                               >  2:735744‑M1/94‑101 (MQ=255)
        cTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTg                                                                                              >  1:1309826/1‑101 (MQ=255)
        cTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTg                                                                                              >  1:238305/1‑101 (MQ=255)
          cttcaggtgttagtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGc                                                                                            <  2:225700‑M1/12‑1 (MQ=255)
           taGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCg                                                                                           >  1:141632/1‑101 (MQ=255)
           taGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCg                                                                                           <  2:1698511/101‑1 (MQ=255)
           taGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCg                                                                                           >  1:883955/1‑101 (MQ=255)
            ctagcttcaggtgttagtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGCAGGTGGCgg                                                                                          <  1:849217‑M1/13‑1 (MQ=255)
               tCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAAt                                                                                       <  2:170392/101‑1 (MQ=255)
                cttcaggtgttagtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAAtt                                                                                      >  2:563839‑M1/85‑101 (MQ=255)
                  gTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTgg                                                                                    <  1:1643425/101‑1 (MQ=255)
                  gTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTgg                                                                                    >  1:1720214/1‑101 (MQ=255)
                   ttGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGt                                                                                   <  1:593386/101‑1 (MQ=255)
                      gtgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGa                                                                                <  1:621000‑M1/24‑1 (MQ=255)
                       tgttcttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGAc                                                                               <  1:29170‑M1/25‑1 (MQ=255)
                       tAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGAc                                                                               <  2:1665787/101‑1 (MQ=255)
                       tAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGAc                                                                               <  1:345065/101‑1 (MQ=255)
                           cttacggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACgcgc                                                                           <  2:9599‑M1/29‑1 (MQ=255)
                            gtgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCt                                                                          >  1:1338546‑M1/73‑101 (MQ=255)
                            cccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCt                                                                          <  2:1060582/101‑1 (MQ=255)
                            cccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCt                                                                          >  2:1710477/1‑101 (MQ=255)
                             tgtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTa                                                                         >  2:784567‑M1/72‑101 (MQ=255)
                             ccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTa                                                                         >  2:157187/1‑101 (MQ=255)
                              gtccttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAg                                                                        <  1:542022‑M1/31‑1 (MQ=255)
                              acggacgtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAg                                                                        <  1:1694824‑M1/32‑1 (MQ=255)
                                 cttacggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCtt                                                                     <  2:1500156‑M1/34‑1 (MQ=255)
                                    gtgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAg                                                                  <  2:444340‑M1/38‑1 (MQ=255)
                                    acggacgtgggggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAg                                                                  >  2:533442‑M1/65‑101 (MQ=255)
                                     tgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAgg                                                                 >  1:98906‑M1/63‑101 (MQ=255)
                                     tgggggttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAgg                                                                 <  2:70293‑M1/39‑1 (MQ=255)
                                       gATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGgtg                                                               >  2:249980/1‑101 (MQ=255)
                                       gATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGgtg                                                               <  1:1579578/101‑1 (MQ=255)
                                       gATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGgtg                                                               >  1:1301431/1‑101 (MQ=255)
                                          gttcaagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTa                                                            >  2:651586‑M1/58‑101 (MQ=255)
                                            cAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAgt                                                          <  1:1083724/101‑1 (MQ=255)
                                              gggttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAgtgt                                                        >  1:680668‑M1/55‑101 (MQ=255)
                                              aagtcccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAgtgt                                                        <  1:930601‑M1/48‑1 (MQ=255)
                                                 ttcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGttagtgttct                                                     >  1:451340‑M1/52‑98 (MQ=255)
                                                 gTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCt                                                     >  2:34010/1‑101 (MQ=255)
                                                  tcaagtcccccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCtt                                                    >  1:1431687‑M1/51‑101 (MQ=255)
                                                  tCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGTCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCtt                                                    <  1:1382368/101‑1 (MQ=255)
                                                   ccccccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTa                                                   <  1:367675‑M1/53‑1 (MQ=255)
                                                       ggTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGa                                               >  1:1010500/1‑101 (MQ=255)
                                                       ccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGa                                               <  1:161871‑M1/57‑1 (MQ=255)
                                                       ccctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGa                                               <  2:914535‑M1/57‑1 (MQ=255)
                                                        gTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGAc                                              >  2:895203/1‑101 (MQ=255)
                                                        cctcgcaccaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGAc                                              <  1:580243‑M1/58‑1 (MQ=255)
                                                          cccccctcgcaccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGt                                            >  1:1500162‑M1/43‑101 (MQ=255)
                                                            gAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTgg                                          >  1:650636/1‑101 (MQ=255)
                                                            gAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGGAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTgg                                          <  1:720612/101‑1 (MQ=255)
                                                              accaaacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTgggg                                        >  2:405026‑M1/38‑101 (MQ=255)
                                                              aTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTgggg                                        <  2:59542/101‑1 (MQ=255)
                                                                  aacgaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTc                                    >  1:769124‑M1/34‑101 (MQ=255)
                                                                    accaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCaa                                  <  1:1029216‑M1/69‑1 (MQ=255)
                                                                     tAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAg                                 <  2:1363628/101‑1 (MQ=255)
                                                                     tAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAg                                 <  1:113274/101‑1 (MQ=255)
                                                                     tAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAg                                 <  1:895208/101‑1 (MQ=255)
                                                                     gaggcgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAg                                 >  2:1281909‑M1/31‑101 (MQ=255)
                                                                     ccaaaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAg                                 >  2:1190003‑M1/32‑101 (MQ=255)
                                                                        ccACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTcc                              >  2:806895/1‑101 (MQ=255)
                                                                        aaaaccacgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTcc                              <  2:679819‑M1/73‑1 (MQ=255)
                                                                         cgatatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTccc                             <  2:1652597‑M1/75‑1 (MQ=255)
                                                                           atatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTccccc                           <  1:1260058‑M1/77‑1 (MQ=255)
                                                                           atatcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTTAAGTccccc                           <  2:1434246‑M1/77‑1 (MQ=255)
                                                                             atcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTccccccc                         <  1:1097261‑M1/79‑1 (MQ=255)
                                                                             atcaaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAGGccccccc                         <  1:1453170‑M1/79‑1 (MQ=255)
                                                                              cATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTcccccccc                        >  2:501044/1‑101 (MQ=255)
                                                                               cgttgatattgctcgcactggGGGAAGGTGGCGGGATTGGGAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCt                       <  2:206148‑M1/80‑1 (MQ=255)
                                                                               cgttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCt                       >  1:746869‑M1/22‑101 (MQ=255)
                                                                               caaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCt                       >  1:9599‑M1/21‑101 (MQ=255)
                                                                               attattAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGCCCCCCCCt                       >  1:52112/1‑101 (MQ=255)
                                                                                aaaaaaagtaagatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTc                      >  2:215395‑M1/20‑101 (MQ=255)
                                                                                 ttgatattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCg                     >  2:308715‑M1/20‑101 (MQ=255)
                                                                                 tattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCg                     <  2:1086778/101‑1 (MQ=255)
                                                                                 tattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCg                     <  1:866375/101‑1 (MQ=255)
                                                                                     tattgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGcacc                 <  2:1158829‑M1/86‑1 (MQ=255)
                                                                                        tgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTcgcaccaaa              <  1:342733‑M1/89‑3 (MQ=255)
                                                                                        tgctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTcgcaccaaa              <  1:727502‑M1/89‑3 (MQ=255)
                                                                                        aGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACg              <  2:874038/101‑1 (MQ=255)
                                                                                        aGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACg              >  1:496928/1‑101 (MQ=255)
                                                                                         attgatggtatgcgaaggtGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaa             <  2:1094162‑M2/92‑4 (MQ=255)
                                                                                          ctcgcactggGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCctcgcaccaaacg            >  1:1155851‑M1/11‑97 (MQ=255)
                                                                                          agatgactgTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAGTCCCCCCCctcgcaccaatta            <  1:1561271‑M1/92‑5 (MQ=255)
                                                                                            gtgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACtt          <  1:32145/101‑1 (MQ=255)
                                                                                            atgactgTGCGAAGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGGGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCccctcgcaccaattatc          <  2:1541706‑M1/94‑7 (MQ=255)
                                                                                              gactgtgcgaaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctt        <  2:1034290‑M2/96‑9 (MQ=255)
                                                                                               aCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTaa       >  1:1279386/1‑101 (MQ=255)
                                                                                                ctgggcgaaGGTGGCGGAATTTGTAGACGGGCTAGGTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGCCCCCCCCTCGCACCAattatcttta      >  2:1596328‑M2/5‑91 (MQ=255)
                                                                                                 tgtgcGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAattatctttac     >  2:1260053‑M2/3‑90 (MQ=255)
                                                                                                 tgggcgaAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGCCCCCCCCCTCGCACCAaacgaggcgat     >  2:321119‑M2/4‑90 (MQ=255)
                                                                                                  aTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAaaaaccacgtta    <  2:344065‑M2/101‑13 (MQ=255)
                                                                                                    gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAAt  <  2:1010495/101‑1 (MQ=255)
                                                                                                    gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGGGCTAGTGTCCTTACGGACGTGGGGGGTCAAGTCCCCCCCCTCGCACCAattatcttttcttc  <  2:498366‑M2/101‑15 (MQ=255)
                                                                                                    |                                                                                                    
AGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACGACTTTAAAGAAT  >  9/35570‑35770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.