New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 82 11966 =1 (0.020)83 (3.250)
+TGTAC
65/190 0.0 98.3% intergenic (–/–) –/– –/–
?92 = 500 2 (0.300)intergenic (–/–) –/– –/–

AGGCTATCTCGTGCAACGTACAGTTGAATACGGCCACCGACATCCTGCAACGTTACAAAGGAGGCTTTCCCCATGATACGACGGGTCATCATTCGGCCAGCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGAAAATCATTG  >  82/11866‑12066
                                                                                                    |                                                                                                    
gccagcgttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacac                                                                                                      >  2:478959‑M1/101‑101 (MQ=255)
gccagcgttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacac                                                                                                      <  2:1454257‑M1/1‑1 (MQ=255)
  cagcgttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCaa                                                                                                    <  2:1344621‑M1/3‑1 (MQ=255)
  cagcgttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgacccgattggtgatgtacaCaa                                                                                                    <  1:247133‑M1/3‑1 (MQ=255)
   agcgttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAAc                                                                                                   <  2:731081‑M1/4‑1 (MQ=255)
      gttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCga                                                                                                <  2:55516‑M1/7‑1 (MQ=255)
      gttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCga                                                                                                <  1:233575‑M1/7‑1 (MQ=255)
       ttacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCgag                                                                                               >  1:1611485‑M1/94‑101 (MQ=255)
        tacttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtggtgtacaCAaccggga                                                                                              <  2:842011‑M1/9‑4 (MQ=255)
         tcttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGAc                                                                                             >  2:490923‑M1/92‑101 (MQ=255)
         acttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGAc                                                                                             <  2:995580‑M1/10‑1 (MQ=255)
         acttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGAc                                                                                             <  1:1204882‑M1/10‑1 (MQ=255)
          gTGCAACGTACAGTTGAATACGGCCACCGACATCCTGCAACGTTACAAAGGAGGCTTTCCCCATGATACGACGGGTCATCATTCGGCCAGCAACCGAGACt                                                                                            >  1:1522039/1‑101 (MQ=255)
          cttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACt                                                                                            <  1:1312611‑M1/11‑1 (MQ=255)
          cttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACt                                                                                            <  1:1589108‑M1/11‑1 (MQ=255)
           ttcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACtt                                                                                           <  1:411984‑M1/12‑1 (MQ=255)
            tcaccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTc                                                                                          <  2:72346‑M1/13‑1 (MQ=255)
              cccttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCaa                                                                                        >  2:354718‑M1/87‑101 (MQ=255)
              accttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCaa                                                                                        <  1:1351245‑M1/15‑1 (MQ=255)
                cttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATg                                                                                      <  2:369584‑M1/17‑1 (MQ=255)
                cttctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATg                                                                                      <  2:1016606‑M1/17‑1 (MQ=255)
                  tctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGtt                                                                                    >  2:511410‑M1/83‑101 (MQ=255)
                  tctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGtt                                                                                    >  2:590690‑M1/83‑101 (MQ=255)
                   ctttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGttt                                                                                   <  1:1061164‑M1/20‑1 (MQ=255)
                    tttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTa                                                                                  >  1:1172556‑M1/81‑101 (MQ=255)
                    tttactacccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTa                                                                                  >  1:1050242‑M1/81‑101 (MQ=255)
                     ttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCACTGTTTaa                                                                                 >  1:1043214‑M1/80‑101 (MQ=255)
                     ttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTaa                                                                                 >  2:79407‑M1/80‑101 (MQ=255)
                     ttactgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTaa                                                                                 >  1:1248143‑M1/80‑101 (MQ=255)
                        ctgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGa                                                                              <  2:359241‑M1/25‑1 (MQ=255)
                        ctgcccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAAACGAGACTTCAATGTTTAAGGa                                                                              <  1:1326414‑M1/25‑1 (MQ=255)
                           cccgcttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTc                                                                           <  2:818307‑M1/28‑1 (MQ=255)
                               cttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGt                                                                       >  1:1355972‑M1/70‑101 (MQ=255)
                                ttgcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGtt                                                                      >  1:868927‑M1/69‑101 (MQ=255)
                                  gcgccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTcc                                                                    >  2:879248‑M1/67‑101 (MQ=255)
                                    gccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTg                                                                  >  1:1515415‑M1/65‑101 (MQ=255)
                                     ccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCCGTTCCTgg                                                                 <  2:131773‑M1/38‑1 (MQ=255)
                                     ccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTgg                                                                 >  2:996114‑M1/64‑101 (MQ=255)
                                     ccgctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTgg                                                                 <  1:184685‑M1/38‑1 (MQ=255)
                                       gctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGtt                                                               <  1:1714206‑M1/40‑1 (MQ=255)
                                        ctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTa                                                              <  1:825873‑M1/41‑1 (MQ=255)
                                        ctttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTa                                                              >  2:938805‑M1/61‑101 (MQ=255)
                                         tttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTAt                                                             <  1:941698‑M1/42‑1 (MQ=255)
                                         tttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTAt                                                             >  2:570708‑M1/60‑101 (MQ=255)
                                         tttctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTAt                                                             >  1:983194‑M1/60‑101 (MQ=255)
                                            ctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCt                                                          >  2:1084295‑M1/57‑101 (MQ=255)
                                            ctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCt                                                          <  2:1573703‑M1/45‑1 (MQ=255)
                                            ctctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCt                                                          <  2:1092938‑M1/45‑1 (MQ=255)
                                             tctgcaagaacttttgcttttggatagtccagactgacctgattggtgatgtacaCAACCGAGACTTCAATTTTTAAGGATTCCAGTTCCTGGTTATCCtt                                                         >  2:1705551‑M1/56‑101 (MQ=255)
                                              ctgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTc                                                        >  2:139761‑M1/55‑101 (MQ=255)
                                               tgcaagaacttttgcttgtggatagtccagactgaccggatttgtgatgtacaCAACCGAGACTTCAATGCTTAAGGATTCCAGCTCCTGGTTCTCCTtca                                                       <  1:480682‑M1/48‑2 (MQ=255)
                                               tgcaagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCg                                                       >  2:479431‑M1/54‑101 (MQ=255)
                                                 caagaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCa                                                     <  2:916062‑M1/50‑1 (MQ=255)
                                                   agaacttttgcttgtggataggccagactgaccggattggtggtgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATTCATCGCATc                                                   <  2:1536051‑M1/52‑1 (MQ=255)
                                                    gaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCa                                                  >  2:1011782‑M1/49‑101 (MQ=255)
                                                    gaacttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCa                                                  >  1:1350523‑M1/49‑101 (MQ=255)
                                                        ttttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAAct                                              >  1:19768‑M1/45‑101 (MQ=255)
                                                         tttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAActc                                             >  2:1589102‑M1/44‑101 (MQ=255)
                                                         tttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAActc                                             <  2:1099435‑M1/58‑1 (MQ=255)
                                                         tttgcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAActc                                             <  2:78007‑M1/58‑1 (MQ=255)
                                                            gcttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTc                                          >  1:1546130‑M1/41‑101 (MQ=255)
                                                             cttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCg                                         >  1:869876‑M1/40‑101 (MQ=255)
                                                             cttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCg                                         <  2:761088‑M1/62‑1 (MQ=255)
                                                              ttgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGt                                        >  1:369584‑M1/39‑101 (MQ=255)
                                                               tgtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTg                                       <  2:950460‑M1/64‑1 (MQ=255)
                                                                gtggatagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGc                                      <  1:735626‑M1/65‑1 (MQ=255)
                                                                    atagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACt                                  <  1:1192051‑M1/69‑1 (MQ=255)
                                                                    atagtccagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACt                                  <  1:1139758‑M1/69‑1 (MQ=255)
                                                                          cagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCag                            >  1:56265‑M1/27‑101 (MQ=255)
                                                                          cagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCag                            <  2:438103‑M1/75‑1 (MQ=255)
                                                                          cagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCag                            >  2:1071909‑M1/27‑101 (MQ=255)
                                                                          cagactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCag                            <  2:1479060‑M1/75‑1 (MQ=255)
                                                                            gactgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCagag                          >  1:961374‑M1/25‑101 (MQ=255)
                                                                             actgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAgg                         <  1:782822‑M1/78‑1 (MQ=255)
                                                                              ctgaccggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGt                        <  1:1440411‑M1/79‑1 (MQ=255)
                                                                                 accggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATg                     <  2:27770‑M1/82‑1 (MQ=255)
                                                                                   cggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGt                   >  1:1123350‑M1/18‑101 (MQ=255)
                                                                                    ggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTc                  >  1:358828‑M1/17‑101 (MQ=255)
                                                                                    ggattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTc                  <  1:129327‑M1/85‑1 (MQ=255)
                                                                                     gattggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTcg                 >  2:411979‑M1/16‑101 (MQ=255)
                                                                                        tggtgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGAAAATGATCAGAGGTATGGTCgcgg              <  2:436394‑M1/89‑1 (MQ=255)
                                                                                           tgatgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGa           <  1:1328318‑M1/92‑1 (MQ=255)
                                                                                             atgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGaaa         <  1:790887‑M1/94‑1 (MQ=255)
                                                                                              tgtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGaaaa        >  1:818312‑M1/7‑101 (MQ=255)
                                                                                               gtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGAAAAt       <  2:668383‑M1/96‑1 (MQ=255)
                                                                                               gtacaCAACCGAGACTTCAATGTTTAAGGATTCCAGATCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGCATGGTCGCGGCGAAAAt       <  1:1418357‑M1/96‑1 (MQ=255)
                                                                                                   aCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGAAAATCAtt   <  1:1456198‑M1/100‑1 (MQ=255)
                                                                                                    cAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGAAAATCATTg  >  2:198533/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
AGGCTATCTCGTGCAACGTACAGTTGAATACGGCCACCGACATCCTGCAACGTTACAAAGGAGGCTTTCCCCATGATACGACGGGTCATCATTCGGCCAGCAACCGAGACTTCAATGTTTAAGGATTCCAGTTCCTGGTTATCCTTCGCATCAAACTCTTCGTGCAACTGCTCAGAGGTATGGTCGCGGCGAAAATCATTG  >  82/11866‑12066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.