New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 79 = 212330 (0.000)14 (0.370) 11/200 0.2 100% intergenic (–/–) –/– –/–
?92 1 = 0 (0.000)intergenic (–/–) –/– –/–

TGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  79/21157‑21233
                                                                            |                                            
tGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgc                      >  2:640281‑M1/1‑77 (MQ=255)
 gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcg                     <  2:428174‑M1/101‑26 (MQ=255)
   aGTGCTGGGCAAATTTGATAAAACTGCGGATAAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtc                   >  1:1095977‑M1/1‑74 (MQ=255)
    gTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtct                  >  2:737754‑M1/1‑73 (MQ=255)
     tGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtctt                 >  2:942974‑M1/1‑72 (MQ=255)
         gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttctca             <  2:1083830‑M1/101‑34 (MQ=255)
         gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca             <  2:1506601‑M1/101‑34 (MQ=255)
         gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca             <  2:590900‑M1/101‑34 (MQ=255)
         gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca             <  1:443147‑M1/101‑34 (MQ=255)
            cAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggc          >  1:105502‑M1/1‑65 (MQ=255)
             aaaTTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcc         >  1:1536938‑M1/1‑64 (MQ=255)
               aTTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggccta       >  2:223247‑M1/1‑62 (MQ=255)
                  tGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgc    >  1:358803‑M1/1‑59 (MQ=255)
                    aTAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgcca  >  2:68051‑M1/1‑57 (MQ=255)
                                                                            |                                            
TGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  79/21157‑21233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.