| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 74 | = 22019 | 0 (0.000) | 25 (0.440) +GCGCGT |
23/188 | 2.2 | 34.5% | intergenic (–/–) | –/– | –/– |
| ? | 91 | 8342 = | 101 (1.650) | intergenic (–/–) | –/– | –/– | |||||
GCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 74/21919‑22019 | gCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTg < 1:855023/101‑1 (MQ=255) tcctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgc > 1:876149‑M1/1‑99 (MQ=255) cATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgt > 1:1140626‑M1/1‑95 (MQ=255) aTGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtc > 1:1001994‑M1/1‑94 (MQ=255) tGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtct < 2:81868‑M1/101‑9 (MQ=255) gATCATCACGGCGGTCATGGTCCAGGCAAACATCAGCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtctt < 1:1534437‑M1/101‑10 (MQ=255) gATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtctt < 1:1529277‑M1/101‑10 (MQ=255) atcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatca < 2:1694988‑M1/101‑14 (MQ=255) tcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcag > 1:394669‑M1/1‑87 (MQ=255) tcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcag < 1:167360‑M1/101‑15 (MQ=255) caCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcagg < 2:327411‑M1/101‑16 (MQ=255) aCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggc > 1:631376‑M1/1‑85 (MQ=255) ggcggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcct > 1:955568‑M1/1‑83 (MQ=255) cggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcagtcctac < 2:975510‑M1/101‑21 (MQ=255) ggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacg > 1:111960‑M1/1‑80 (MQ=255) gggTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccg > 1:872058‑M1/1‑38 (MQ=255) gTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccgga > 2:1470794‑M1/1‑36 (MQ=255) aaTCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataagg < 1:1367504‑M1/101‑71 (MQ=255) aTCCGGCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggc > 1:781170‑M1/1‑30 (MQ=255) ggCATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttc < 2:342074‑M1/101‑76 (MQ=255) ggCATTCAGAGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttc > 2:1252039‑M1/1‑26 (MQ=255) cATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcac < 1:627799‑M1/101‑78 (MQ=255) cATTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcac < 2:111960‑M1/101‑78 (MQ=255) aTTCAGCGCCTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcacg > 1:1592075‑M1/1‑23 (MQ=255) tCAGCGCCTGATGCGACGCTGgcgcgtcttatcagtcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcacgcc < 1:1610781‑M1/101‑81 (MQ=255) cTGATGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcacgccgcatccg > 2:425858‑M1/1‑14 (MQ=255) aTGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcacgccgcatccggca > 1:1047888‑M1/1‑11 (MQ=255) tGCGACGCTGgcgcgtcttatcaggcctacgtgaattctgcaatatattgaatctgcatgcttttgtaggccggataaggcgttcacgccgcatccggcat > 1:990425‑M1/1‑10 (MQ=255) | GCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 74/21919‑22019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |