| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 67 | 1 = | 0 (0.000) | 43 (0.650) | 29/192 | 2.0 | 57.7% | intergenic (–/–) | –/– | –/– |
| ? | 9 | 37287 = | 63 (0.930) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACAAAATC > 67/1‑100 | ggatgcgatgctgacgcatcttatccagcctacagaacgctgcaatttattgaatttgcaaggattgtaggccggataaggcgttcacgccgcatccGGCa > 1:1104556‑M1/98‑101 (MQ=255)ggatgcgatgctgacgcatcttatccagcctacagaacgctgcaatttattgaatttgcaaggattgtaggccggataaggcgttcacgccgcatccGGCa < 1:428770‑M1/4‑1 (MQ=255) aatttccatacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTaaa < 1:1006562‑M1/35‑1 (MQ=255) tttccatacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATc > 1:703240‑M1/65‑101 (MQ=255) tttccatacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATc < 1:1304904‑M1/37‑1 (MQ=255) tccatacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTg < 1:1506764‑M1/39‑1 (MQ=255) atacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGttt < 2:1118986‑M1/42‑1 (MQ=255) atacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGttt > 2:1447126‑M1/60‑101 (MQ=255) atacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGttt > 1:598390‑M1/60‑101 (MQ=255) atacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGttt < 2:1428774‑M1/42‑1 (MQ=255) tacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTa > 2:791391‑M1/59‑101 (MQ=255) tacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTa < 1:1610749‑M1/43‑1 (MQ=255) tacaatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTa > 2:151363‑M1/59‑101 (MQ=255) caatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAAt > 1:107162‑M1/57‑101 (MQ=255) aatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAAtt > 1:1658438‑M1/56‑101 (MQ=255) aatatattgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAAtt > 2:1455924‑M1/56‑101 (MQ=255) tgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGAt > 2:529237‑M1/49‑101 (MQ=255) tgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGAt > 1:334733‑M1/49‑101 (MQ=255) tgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGAt < 2:303752‑M1/53‑1 (MQ=255) tgaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGAt > 1:1428780‑M1/49‑101 (MQ=255) gaattcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATg > 2:1112370‑M1/48‑101 (MQ=255) attcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTc > 2:1271874‑M1/46‑101 (MQ=255) attcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACAATTTGCCAACAATCTAAATCTGTTTAATTGACGGATgta < 1:1693767‑M1/56‑2 (MQ=255) ttcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCa > 1:1251585‑M1/45‑101 (MQ=255) tcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGGATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAg > 1:236403‑M1/44‑101 (MQ=255) tcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAg > 2:94572‑M1/44‑101 (MQ=255) tcgcaaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAg < 2:275469‑M1/58‑1 (MQ=255) caaggatttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACa < 2:74909‑M1/61‑1 (MQ=255) ttgtaggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCa < 1:1660782‑M1/68‑1 (MQ=255) ggccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTat > 2:274853‑M1/29‑101 (MQ=255) ccggataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTTCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTatca > 2:30029‑M1/27‑101 (MQ=255) gataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTAtcatca > 1:987978‑M1/24‑101 (MQ=255) ataaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCAc > 2:1006557‑M1/23‑101 (MQ=255) taaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCAct < 1:2662‑M1/80‑1 (MQ=255) taaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCAct > 1:536994‑M1/22‑101 (MQ=255) aaggcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCActt > 1:810094‑M1/21‑101 (MQ=255) gcgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCActtctt > 1:275469‑M1/18‑101 (MQ=255) cgttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACttcttc > 2:1649379‑M1/17‑101 (MQ=255) ttcacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCAt < 2:1551889‑M1/87‑1 (MQ=255) cacgccgcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCt < 2:740894‑M1/89‑1 (MQ=255) gcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACa > 2:701164‑M1/7‑101 (MQ=255) gcatccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACa < 2:1622206‑M1/95‑1 (MQ=255) atccGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACaaa < 1:426209‑M1/97‑1 (MQ=255) cGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACAAAATc > 2:1618109‑M1/2‑101 (MQ=255) cGGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACAAAATc < 2:568309‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCATGAACAAAGCACACTTTGCCAACAATCTAAATCTGTTTAATTGCCGGATGTCAGACATCCGGCAATTATCATCACTTCTTCATCTGCGACAAAATC > 67/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |