New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 60 | = 24693 | 0 (0.000) | 39 (0.660) | 28/200 | 1.5 | 75.7% | intergenic (–/–) | –/– | –/– |
? | 66 | 3183 = | 25 (0.430) | intergenic (–/–) | –/– | –/– |
ATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 60/24596‑24693 | atatTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtct < 2:1545962‑M1/101‑4 (MQ=255) gTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatcca < 1:761751‑M1/101‑10 (MQ=255) cTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagc > 2:1487068‑M1/1‑90 (MQ=255) tGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcc > 1:1233439‑M1/1‑89 (MQ=255) gcgcAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcct > 2:745412‑M1/1‑88 (MQ=255) gcgcAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcct < 1:1570358‑M1/101‑14 (MQ=255) gcAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctac < 1:1055439‑M1/101‑16 (MQ=255) gcAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctac < 2:1165396‑M1/101‑16 (MQ=255) cAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacg < 2:355647‑M1/101‑17 (MQ=255) cAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacg > 2:1544588‑M1/1‑85 (MQ=255) gTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatcaagcctacggg > 2:1511792‑M1/1‑83 (MQ=255) tAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacggga > 2:991541‑M1/1‑82 (MQ=255) aCCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggatt < 1:266296‑M1/101‑22 (MQ=255) gTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacat > 1:774614‑M1/1‑74 (MQ=255) ccGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgta > 1:1349817‑M1/1‑71 (MQ=255) ccGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgta < 2:1324106‑M1/101‑31 (MQ=255) cGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtag > 2:850945‑M1/1‑70 (MQ=255) gCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagg > 1:55841‑M1/1‑69 (MQ=255) gCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagg > 1:1209973‑M1/1‑69 (MQ=255) cTGGAGCAGATTGTCGGCCTGTACGCAGCGGGGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggat < 2:418873‑M1/101‑39 (MQ=255) cTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggat < 2:21289‑M1/101‑39 (MQ=255) tGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggata > 2:475064‑M1/1‑62 (MQ=255) aGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgt > 2:1300165‑M1/1‑56 (MQ=255) gATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgtt < 1:371244‑M1/101‑47 (MQ=255) gATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgtt < 1:1145329‑M1/101‑47 (MQ=255) aTTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttc < 1:390036‑M1/101‑48 (MQ=255) ttGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttca < 1:269221‑M1/101‑49 (MQ=255) gTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacg > 1:124363‑M1/1‑51 (MQ=255) tCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgc > 2:380986‑M1/1‑50 (MQ=255) cGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgcc < 2:1233434‑M1/101‑53 (MQ=255) cGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgcc > 2:1492264‑M1/1‑49 (MQ=255) cGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgcc > 2:867346‑M1/1‑49 (MQ=255) cTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcat > 2:437409‑M1/1‑45 (MQ=255) gTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggtttgcacatgtagggcggataaggcgttcacgccgcatcc < 2:1042827‑M1/101‑59 (MQ=255) gTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcatcc < 2:1493653‑M1/101‑59 (MQ=255) gTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcatcc > 1:856017‑M1/1‑43 (MQ=255) gcgcAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcatccgccagtggcg < 2:376410‑M1/101‑69 (MQ=255) gcAATAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcatccgccagtggcgcg > 1:1411700‑M1/1‑31 (MQ=255) aTAAATGCCGGATGCGACGCTTGCCGCAtcttatccagcctacgggattgcacatgtagggcggataaggcgttcacgccgcatccggcaaaaatttgatt > 1:370499‑M1/1‑28 (MQ=255) | ATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 60/24596‑24693 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |