New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 43 7 =0 (0.000)58 (0.890)
+A
47/198 0.3 62.3% intergenic (–/–) –/– –/–
?5 = 1333 71 (1.010)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAGCGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGA  >  43/1‑104
                                                                                                    |                                                                                                 
gcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtg                                                                                                   >  2:393643‑M1/101‑101 (MQ=255)
gcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtg                                                                                                   >  1:1695951‑M1/101‑101 (MQ=255)
     ccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTAt                                                                                              <  2:339286‑M1/6‑1 (MQ=255)
        atatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATggg                                                                                           <  1:363837‑M1/9‑1 (MQ=255)
        atatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATggg                                                                                           <  2:224254‑M1/9‑1 (MQ=255)
              gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACa                                                                                     >  1:1321690‑M1/87‑101 (MQ=255)
              gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACa                                                                                     >  1:1180163‑M1/87‑101 (MQ=255)
               ccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACAt                                                                                    >  2:1657960‑M1/86‑101 (MQ=255)
               ccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACAt                                                                                    <  1:1580854‑M1/16‑1 (MQ=255)
                 agaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATcc                                                                                  <  2:44487‑M1/18‑1 (MQ=255)
                 agaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATcc                                                                                  >  1:302359‑M1/84‑101 (MQ=255)
                 agaattgctgaccagntatcgnganagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATcc                                                                                  >  2:855884‑M1/84‑101 (MQ=255)
                   aattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATcccc                                                                                >  1:358209‑M1/82‑101 (MQ=255)
                      tgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtgataccacaacccttaagttagtGCTTATGGGGAAACATCCCCata                                                                             <  2:113711‑M1/23‑1 (MQ=255)
                      tgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCata                                                                             <  2:979346‑M1/23‑1 (MQ=255)
                        ctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCAtata                                                                           <  2:813647‑M1/25‑1 (MQ=255)
                         tgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATAc                                                                          <  2:551960‑M1/26‑1 (MQ=255)
                         tgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATAc                                                                          <  1:855839‑M1/26‑1 (MQ=255)
                          gaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACt                                                                         <  2:1598289‑M1/27‑1 (MQ=255)
                           accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTg                                                                        <  1:860304‑M1/28‑1 (MQ=255)
                             cagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGAc                                                                      <  1:607586‑M1/30‑1 (MQ=255)
                             cagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGAc                                                                      <  2:1681825‑M1/30‑1 (MQ=255)
                                ttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTa                                                                   <  1:1175865‑M1/33‑1 (MQ=255)
                                 tatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTAc                                                                  <  1:807757‑M1/34‑1 (MQ=255)
                                         gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAAt                                                          <  1:1312207‑M1/42‑1 (MQ=255)
                                          agtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATa                                                         >  1:913939‑M1/59‑101 (MQ=255)
                                             aattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGAt                                                      <  2:88345‑M1/46‑1 (MQ=255)
                                               ttcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATgg                                                    >  2:1038352‑M1/54‑101 (MQ=255)
                                               ttcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATgg                                                    >  1:490450‑M1/54‑101 (MQ=255)
                                                tcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc                                                   >  2:1312201‑M1/53‑101 (MQ=255)
                                                       cacgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc                                            <  1:471006‑M1/56‑1 (MQ=255)
                                                        acgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGca                                           >  2:1602978‑M1/45‑101 (MQ=255)
                                                         cgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac                                          >  1:986759‑M1/44‑101 (MQ=255)
                                                         cgttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac                                          <  1:257282‑M1/58‑1 (MQ=255)
                                                           ttaaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAg                                        <  2:1389500‑M1/60‑1 (MQ=255)
                                                            taaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGAACATGTTAATAGATGGCGTGAAGAACAGt                                       <  2:919793‑M1/61‑1 (MQ=255)
                                                             aaatcatatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTc                                      <  2:224721‑M1/62‑1 (MQ=255)
                                                                  atatcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTc                                 <  1:497896‑M1/67‑1 (MQ=255)
                                                                    atcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCAt                               <  1:608722‑M1/69‑1 (MQ=255)
                                                                    atcaggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCAt                               <  2:368450‑M1/69‑1 (MQ=255)
                                                                       aggcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTg                            <  1:775427‑M1/72‑1 (MQ=255)
                                                                         gcgtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGAt                          >  1:703336‑M1/28‑101 (MQ=255)
                                                                           gtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTa                        <  1:1691236‑M1/76‑1 (MQ=255)
                                                                           gtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTa                        <  1:1534066‑M1/76‑1 (MQ=255)
                                                                           gtaataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTa                        >  2:690297‑M1/26‑101 (MQ=255)
                                                                            taataccacagcccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAc                       <  2:1145806‑M1/77‑1 (MQ=255)
                                                                            taataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAc                       <  2:1533094‑M1/77‑1 (MQ=255)
                                                                             aataccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc                      <  1:1402641‑M1/78‑1 (MQ=255)
                                                                               taccacaacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTg                    <  2:961505‑M1/80‑1 (MQ=255)
                                                                                     aacccttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa              >  1:66677‑M1/16‑101 (MQ=255)
                                                                                          ttaagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa         <  2:1079165‑M1/91‑1 (MQ=255)
                                                                                           taagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa        <  2:366915‑M1/92‑1 (MQ=255)
                                                                                            aagttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc       >  1:368663‑M1/9‑101 (MQ=255)
                                                                                             agttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACt      <  1:1643634‑M1/94‑1 (MQ=255)
                                                                                             agttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACt      >  1:813652‑M1/8‑101 (MQ=255)
                                                                                              gttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTa     >  2:1285075‑M1/7‑101 (MQ=255)
                                                                                               ttagtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa    >  2:1207994‑M1/6‑101 (MQ=255)
                                                                                                 agtGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga  >  1:171546‑M1/4‑101 (MQ=255)
                                                                                                    |                                                                                                 
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAGCGCTTATGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGA  >  43/1‑104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.