New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 38 21218 =53 (0.870)44 (0.890) 40/172 0.2 65.9% intergenic (–/–) –/– –/–
?39 = 32788 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 305 total aligned reads displayed.

GCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCATTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGT  >  38/21118‑21318
                                                                                                    |                                                                                                    
ttaaccgcgttatccgtccgcgtttgaagttgcattaatcgacgtacactggcggatgtggcataaaagcctcatccgccctggacaaatgggacgaacgg                                                                                                      <  2:1227385‑M1/1‑1 (MQ=255)
gacgcgttaagcgtcgcatcaggcgttgATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCg                                                                                                      >  2:1037007‑M1/29‑101 (MQ=255)
 acgcggcaagcgtcgcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGt                                                                                                     <  1:851014‑M1/74‑1 (MQ=255)
  aaccgcgttatccgtccgcgtttgaagttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTa                                                                                                    <  2:377634‑M1/3‑1 (MQ=255)
   gcggcaagcgtcgcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAg                                                                                                   >  2:323146‑M1/26‑101 (MQ=255)
   gcggcaagcgtcgcatcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAg                                                                                                   >  2:332393‑M1/26‑101 (MQ=255)
   gcggcaagcgtcgcatcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAg                                                                                                   >  1:300335‑M1/26‑101 (MQ=255)
    cggcaagcgtcgcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCgtacg                                                                                                  >  2:774231‑M2/25‑99 (MQ=255)
        aagcgtcgcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTg                                                                                              >  1:503309‑M2/21‑101 (MQ=255)
        aagcgtcgcatcaggcgttgATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTg                                                                                              <  1:777251‑M2/81‑1 (MQ=255)
           cgtcgcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATa                                                                                           <  2:209397‑M2/84‑1 (MQ=255)
           cgtcgcatcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATa                                                                                           >  1:456216‑M1/18‑101 (MQ=255)
            gtcgcatcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATaa                                                                                          <  1:1635401‑M1/85‑1 (MQ=255)
               gtccgcgtttgaagttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGAc                                                                                       >  1:107310‑M1/86‑101 (MQ=255)
               gcatcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGAc                                                                                       <  2:1291768‑M2/88‑1 (MQ=255)
               gcatcaggcgttgATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGAc                                                                                       <  2:1403884‑M2/88‑1 (MQ=255)
               gcatcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGAc                                                                                       >  1:372920‑M1/14‑101 (MQ=255)
                catcaggcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGAcg                                                                                      <  2:1347591‑M1/89‑1 (MQ=255)
                 ccgcgtttgaagttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGAcgc                                                                                     >  1:408846‑M1/84‑101 (MQ=255)
                 atcaggcgttgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGAcgc                                                                                     >  1:1033519‑M2/12‑101 (MQ=255)
                    aggcgttgATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAgacgcggc                                                                                  >  1:334945‑M2/9‑99 (MQ=255)
                     ggcgttgATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAagacgcggca                                                                                 <  2:141395‑M2/94‑4 (MQ=255)
                      gcattgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTaa                                                                                <  1:1123950‑M1/95‑1 (MQ=255)
                        tgaagttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGc                                                                              >  2:1561879‑M1/77‑101 (MQ=255)
                        gttgaTGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGc                                                                              >  1:595871/5‑101 (MQ=38)
                        gttgaTGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGc                                                                              <  1:535158/97‑1 (MQ=38)
                        gttgaTGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGc                                                                              >  2:1153901/5‑101 (MQ=38)
                          tgATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGt                                                                            <  2:1460694‑M1/99‑1 (MQ=255)
                           gaTGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTc                                                                           <  2:184291/100‑1 (MQ=255)
                           agttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTc                                                                           >  2:1618505‑M1/74‑101 (MQ=255)
                           agttgcattaatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTc                                                                           >  1:1718332‑M1/74‑101 (MQ=255)
                            aTGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCg                                                                          >  1:720487/1‑101 (MQ=255)
                               tCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCAt                                                                       <  2:955538/101‑1 (MQ=255)
                                  gATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAg                                                                    <  2:612916/101‑1 (MQ=38)
                                   aTGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAgg                                                                   <  2:868012/101‑1 (MQ=255)
                                    aatcgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGc                                                                  <  1:1390308‑M1/37‑1 (MQ=255)
                                       cgacgtacactggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCAtt                                                               <  1:1384226‑M1/40‑1 (MQ=255)
                                          gTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGttgat                                                            >  1:1679982/1‑98 (MQ=255)
                                          gTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGttgat                                                            <  1:318248/101‑4 (MQ=255)
                                          gTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACACGTTAAGCGTCGCATCAGGCGttgat                                                            <  2:305714/101‑4 (MQ=255)
                                          ataAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCac                                                            >  1:68051‑M1/2‑99 (MQ=255)
                                          ataAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCac                                                            <  2:720482‑M1/100‑3 (MQ=255)
                                          ataAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCac                                                            >  2:105502‑M1/2‑99 (MQ=255)
                                          ataAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCac                                                            >  1:557608‑M1/2‑99 (MQ=255)
                                          ataAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAAACGCGGAAAGCGTCGCATCAGGCATTCac                                                            >  2:1254750‑M1/2‑99 (MQ=255)
                                          atAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGttgat                                                            >  1:744237/2‑98 (MQ=37)
                                           tAAAAGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGttgatg                                                           >  2:268631/1‑97 (MQ=37)
                                              aCGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacat                                                        <  2:89975‑M1/101‑7 (MQ=255)
                                                gCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcgga                                                      <  1:1288090‑M2/101‑10 (MQ=255)
                                                 tggcggatgtggcataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGAct                                                     <  1:1572017‑M1/50‑1 (MQ=255)
                                                  cTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatg                                                    <  2:43912‑M2/101‑12 (MQ=255)
                                                  cTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgcc                                                    <  1:212451‑M1/101‑11 (MQ=255)
                                                    tATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcg                                                  <  1:1337669‑M2/101‑14 (MQ=255)
                                                     aTCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcgg                                                 >  1:191887‑M2/1‑87 (MQ=255)
                                                       ccGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtg                                               <  1:288208‑M1/101‑16 (MQ=255)
                                                         gACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcata                                             >  1:1444452‑M2/1‑83 (MQ=255)
                                                          aCCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataa                                            <  2:844327‑M2/101‑20 (MQ=255)
                                                             tACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacg                                         <  1:945305‑M2/101‑23 (MQ=255)
                                                              ataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCAtt                                        <  2:1204026‑M1/63‑1 (MQ=255)
                                                              ataaacgcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCAtt                                        <  1:1098144‑M1/63‑1 (MQ=255)
                                                              aCAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgc                                        <  1:120595‑M2/101‑24 (MQ=255)
                                                              aCAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgc                                        <  1:471317‑M2/101‑24 (MQ=255)
                                                                aaaaTCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgcct                                      >  1:931388‑M2/1‑76 (MQ=255)
                                                                 aaaTCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgcctt                                     <  2:275919‑M2/101‑27 (MQ=255)
                                                                  aaTCACGCTAAATCAGCCTATAGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgcctta                                    >  2:1023196‑M2/1‑74 (MQ=255)
                                                                    gcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCATTAAGTAt                                  <  2:79922‑M1/69‑1 (MQ=255)
                                                                    gcctcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCATTAAGTAt                                  >  1:1139923‑M1/33‑101 (MQ=255)
                                                                     cACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatcc                                 >  2:1675310‑M2/1‑71 (MQ=255)
                                                                     cACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGGCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatcc                                 >  2:108813‑M2/1‑71 (MQ=255)
                                                                      aCGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccg                                <  2:541764‑M2/101‑32 (MQ=255)
                                                                       tcatccgccctggacaaatggtacgagcgGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCATTAAGTATTTc                               >  2:25229‑M1/30‑101 (MQ=255)
                                                                       cGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatc                               <  1:1664545‑M1/101‑32 (MQ=255)
                                                                         cTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacc                             <  1:958379‑M2/101‑35 (MQ=255)
                                                                         cTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacc                             <  2:535153‑M2/101‑35 (MQ=255)
                                                                           aaaTCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttca                           >  2:1539221‑M1/1‑66 (MQ=255)
                                                                             aTCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaat                         <  1:984225‑M1/101‑38 (MQ=255)
                                                                             aTCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaat                         >  2:1095972‑M1/1‑64 (MQ=255)
                                                                              tCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaatt                        >  2:35064‑M1/1‑63 (MQ=255)
                                                                                aGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaa                      <  2:16459‑M2/101‑42 (MQ=255)
                                                                                aGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaa                      <  2:8417‑M2/101‑42 (MQ=255)
                                                                                aGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaattat                      >  1:1395758‑M1/1‑61 (MQ=255)
                                                                                 ggCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaat                     >  1:873008‑M2/1‑59 (MQ=255)
                                                                                    tATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaactccttatccgacctacaaaatcac                  >  2:1713215‑M2/1‑56 (MQ=255)
                                                                                    tATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTAAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcac                  <  1:254663‑M2/101‑46 (MQ=255)
                                                                                    tATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcac                  <  1:393519‑M2/101‑46 (MQ=255)
                                                                                     aTTGCGCTGTCTTGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgcctcggcgatatccccggcaatcttcaattattgatc                 >  2:510865‑M1/1‑56 (MQ=255)
                                                                                     aTTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacg                 >  1:798387‑M2/1‑55 (MQ=255)
                                                                                     aTTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacg                 >  1:630633‑M2/1‑55 (MQ=255)
                                                                                     aTTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacg                 >  1:43912‑M2/1‑55 (MQ=255)
                                                                                     aTTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacg                 >  1:1550795‑M2/1‑55 (MQ=255)
                                                                                      ttGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaattattgatcc                <  2:1305503‑M1/101‑47 (MQ=255)
                                                                                        gcgcTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacgcta              >  1:130457‑M2/1‑52 (MQ=255)
                                                                                           cTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacgctaaat           >  1:100431‑M2/1‑49 (MQ=255)
                                                                                           cTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCGTTgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacgctaaat           <  2:1427012‑M2/101‑53 (MQ=255)
                                                                                            tGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatc          >  1:1602020‑M2/1‑48 (MQ=255)
                                                                                             gTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTCacacattgccgggtggatatccccggcaatcttcaattattgatccgcagttt         <  2:758491‑M1/101‑54 (MQ=255)
                                                                                              tCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcag        >  1:1477187‑M2/1‑46 (MQ=255)
                                                                                              tCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcag        >  2:492005‑M2/1‑46 (MQ=255)
                                                                                                 ggCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcaggct     >  2:729867‑M2/1‑43 (MQ=255)
                                                                                                   cGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTgatgtcggatgcggcataaacgccttatccgccctacaaaatcacgctaaatcaggctat   <  2:1388476‑M2/101‑61 (MQ=255)
                                                                                                    |                                                                                                    
GCGCTGTTGTTCTGATTTGAGGGAAAACATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCATTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGT  >  38/21118‑21318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.