| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 31 | 1 = | 0 (0.000) | 64 (1.960) +CTTATTGATAGTGTTTTA |
47/164 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 83 | = 998 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTTAT > 31/1‑101 | cacgcctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagtt > 2:1136046‑M1/100‑101 (MQ=255) acgcctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTg < 1:1254340‑M1/3‑1 (MQ=255) gcctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGa > 2:512166‑M1/97‑101 (MQ=255) ctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgttcaaactaaaacactatcaataagTTGGAGt > 2:1658569‑M1/95‑101 (MQ=255) ctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGt > 1:1717006‑M1/95‑101 (MQ=255) ctcgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccgggggtaaccgcctgctcaaactaaaacactatcaataagTTGGagc < 1:1598823‑M1/7‑2 (MQ=255) cgaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCa > 1:508194‑M1/93‑101 (MQ=255) gaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCAt < 1:1408803‑M1/10‑1 (MQ=255) gaagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggctaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCAt < 1:98615‑M1/10‑1 (MQ=255) aagagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCAtt > 1:84170‑M1/91‑101 (MQ=255) agagatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTa > 2:1042114‑M1/90‑101 (MQ=255) gatgaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCg > 2:1049011‑M1/87‑101 (MQ=255) gaatggcgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGat > 1:1350848‑M1/84‑101 (MQ=255) cgtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGt < 1:1549899‑M1/24‑1 (MQ=255) gtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGtt > 2:87647‑M1/77‑101 (MQ=255) gtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGtt < 2:1134566‑M1/25‑1 (MQ=255) gtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGtt < 2:953304‑M1/25‑1 (MQ=255) gtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGtt < 1:1362025‑M1/25‑1 (MQ=255) gtaccggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGtt < 2:902089‑M1/25‑1 (MQ=255) accggtggtgccgctgtatggcacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAg > 1:943218‑M1/75‑101 (MQ=255) accggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAg > 2:1388440‑M1/75‑101 (MQ=255) ggtggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGAct > 2:784032‑M1/72‑101 (MQ=255) tggtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGActtc < 1:1191289‑M1/32‑1 (MQ=255) gtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGActtctt > 2:1111518‑M1/68‑101 (MQ=255) gtgccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGActtctt > 1:756440‑M1/68‑101 (MQ=255) gccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTcc > 2:331996‑M1/66‑101 (MQ=255) gccgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTcc > 2:1573444‑M1/66‑101 (MQ=255) cgctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCa > 1:327500‑M1/64‑101 (MQ=255) ctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACt > 2:1705256‑M1/62‑101 (MQ=255) ctgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACt < 2:425437‑M1/40‑1 (MQ=255) tgtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTa < 1:19177‑M1/41‑1 (MQ=255) gtatgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAg < 2:1000293‑M1/42‑1 (MQ=255) atgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGtt > 2:1245982‑M1/58‑101 (MQ=255) atgacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGtt > 1:379150‑M1/58‑101 (MQ=255) gacacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGtttt > 2:871948‑M1/56‑101 (MQ=255) acacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTc > 1:1189818‑M1/55‑101 (MQ=255) cacgccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCg < 1:997890‑M1/48‑1 (MQ=255) gccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTgg > 2:285918‑M1/51‑101 (MQ=255) gccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTgg < 2:814966‑M1/51‑1 (MQ=255) gccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTgg > 1:902094‑M1/51‑101 (MQ=255) ccgctttccggggttcatcgcctgctcaaactaaaacactatcaataagCGGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGc < 2:1078383‑M1/52‑1 (MQ=255) ccgctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGc < 2:1180472‑M1/52‑1 (MQ=255) gctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCta < 1:1326990‑M1/54‑1 (MQ=255) ctttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCtat < 2:1182486‑M1/55‑1 (MQ=255) ttgcggagttacctgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCtatat > 2:1334585‑M1/45‑101 (MQ=255) ttccggggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCtatat > 2:991595‑M1/45‑101 (MQ=255) gggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCtatatatata > 1:852611‑M1/40‑101 (MQ=255) ggttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATaa > 1:959199‑M1/39‑101 (MQ=255) gttaaccgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATaaa < 1:325727‑M1/64‑1 (MQ=255) accgcctgctcaaactaaagcactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAg > 1:147679‑M1/34‑101 (MQ=255) accgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAg > 1:910410‑M1/34‑101 (MQ=255) cgcctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGtt > 2:570464‑M1/32‑101 (MQ=255) cctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTAt < 2:1173601‑M1/72‑1 (MQ=255) cctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTAt < 1:1510856‑M1/72‑1 (MQ=255) cctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTAt < 1:1445604‑M1/72‑1 (MQ=255) cctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTAt < 2:793598‑M1/72‑1 (MQ=255) ctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATc > 2:105695‑M1/29‑101 (MQ=255) ctgctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATc > 2:799059‑M1/29‑101 (MQ=255) gctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAg < 1:715217‑M1/75‑1 (MQ=255) ctcaaactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAgg < 1:224285‑M1/76‑1 (MQ=255) aactaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGAt > 1:1029915‑M1/22‑101 (MQ=255) actaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGAtt > 1:953309‑M1/21‑101 (MQ=255) actaaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGAtt < 1:914870‑M1/81‑1 (MQ=255) ctaaaacactatcaataagTCGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTACTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGAttt < 2:409819‑M1/82‑1 (MQ=255) aaaacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGAttttt > 1:1706023‑M1/18‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 1:1487438‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 1:425442‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 1:1134571‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 1:1180477‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 2:102792‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 1:161146‑M1/16‑101 (MQ=255) aacactatcaataagTTGGAGTCATTACCGGATATTTGTCAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTAt > 2:422972‑M1/16‑101 (MQ=255) acactatcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATg > 2:586402‑M1/15‑101 (MQ=255) atcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTc < 2:1156807‑M1/92‑1 (MQ=255) atcaataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTc < 1:763464‑M1/92‑1 (MQ=255) caataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCAc < 1:495173‑M1/94‑1 (MQ=255) aataagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAgctcgcc > 2:852560‑M1/7‑98 (MQ=255) aagTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACctct < 2:948579‑M1/98‑1 (MQ=255) agTTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCtt > 1:1503833‑M1/3‑101 (MQ=255) ttGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTTAt < 2:678038/101‑1 (MQ=255) ttGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTTAt < 2:715212/101‑1 (MQ=255) ttGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTTAt > 2:66736/1‑101 (MQ=255) ttGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTAAt < 1:1426465/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGAGTCATTACCGGATATTTGTTAGACTTCTTCCCACTAGTTTTCGTGGCTATATATATAAAAAAGTTATCAGGAGATTTTTATGAGCTCACCTCTTAT > 31/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |