| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 23 | = 41186 | 0 (0.000) | 63 (1.060) | 50/166 | 0.1 | 67.7% | intergenic (–/–) | –/– | –/– |
| ? | 41 | = 1567 | 60 (1.030) | intergenic (–/–) | –/– | –/– | |||||
ACAGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 23/41086‑41186 | aCAGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAAC > 1:485874‑M1/1‑101 (MQ=255)aCAGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAAC < 2:950452‑M1/101‑1 (MQ=255) cAGCCAACAAATGCAAAAAGGGCGCCGAAGCGCGC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACg > 2:1270712‑M1/1‑100 (MQ=255) aGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACgg > 2:945514‑M1/1‑99 (MQ=255) aGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACgg > 1:41497‑M1/1‑99 (MQ=255) aGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACgg > 2:288230‑M1/1‑99 (MQ=255) gCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggt > 2:689962‑M1/1‑98 (MQ=255) gCCAACAAAAGCAAAAAGGGCGGCGAAGCGCCCTTTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACgg < 1:1622819‑M1/101‑3 (MQ=255) caacaaATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtac < 2:530698‑M1/101‑6 (MQ=255) aacaaATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacg > 1:552787‑M1/1‑95 (MQ=255) aacaaATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacg < 2:822276‑M1/101‑7 (MQ=255) aacaaATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacg > 1:1702604‑M1/1‑95 (MQ=255) aaaTGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggcc > 1:193375‑M1/1‑92 (MQ=255) aaTGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccg > 2:1550862‑M1/1‑91 (MQ=255) cAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgcctt < 2:1646109‑M1/101‑15 (MQ=255) aaaaGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttca > 2:602738‑M1/1‑85 (MQ=255) aaGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacg > 1:457217‑M1/1‑83 (MQ=255) aaGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacg > 2:1682933‑M1/1‑83 (MQ=255) aGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacgg > 2:1428305‑M1/1‑82 (MQ=255) gcCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgc > 2:875973‑M1/1‑77 (MQ=255) cGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcga > 2:98813‑M1/1‑75 (MQ=255) gAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaa > 1:1564602‑M1/1‑74 (MQ=255) aaGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaa > 1:419547‑M1/1‑73 (MQ=255) ccc‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcag < 2:1195163‑M1/101‑34 (MQ=255) cc‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggatttcccaacgcaaa > 2:279933‑M1/1‑67 (MQ=255) c‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagac < 2:1165673‑M1/101‑36 (MQ=255) tttttAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagacc > 2:1093510‑M1/1‑65 (MQ=255) tttttAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagacc > 2:28780‑M1/1‑65 (MQ=255) tttAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgt > 2:27501‑M1/1‑63 (MQ=255) ttAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtc > 2:1676809‑M1/1‑62 (MQ=255) tAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcg > 2:842704‑M1/1‑61 (MQ=255) ttCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtcc > 2:175704‑M1/1‑58 (MQ=255) gAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatc > 1:1320871‑M1/1‑55 (MQ=255) aaaCTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcg < 2:1634513‑M1/101‑48 (MQ=255) aaaCTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcg > 2:249592‑M1/1‑54 (MQ=255) cTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcga > 2:987562‑M1/1‑51 (MQ=255) aaTTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatc > 1:1066070‑M1/1‑49 (MQ=255) aaTTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatc < 2:1681614‑M1/101‑53 (MQ=255) ttAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgg > 1:1264017‑M1/1‑47 (MQ=255) aaCGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggt < 1:875978‑M1/101‑57 (MQ=255) aaCGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCACGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggt < 2:973283‑M1/101‑57 (MQ=255) aCGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtg > 2:1273778‑M1/1‑44 (MQ=255) cGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtgg < 2:116297‑M1/101‑59 (MQ=255) tAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatca > 1:1128018‑M1/1‑39 (MQ=255) tAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatca > 2:1219453‑M1/1‑39 (MQ=255) ttAGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcaggg < 2:965897‑M1/101‑66 (MQ=255) aGCCCAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggta < 1:867435‑M1/101‑68 (MQ=255) cccAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaac > 2:633616‑M1/1‑32 (MQ=255) ccAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaaca < 1:1711639‑M1/101‑71 (MQ=255) ccAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaaca < 1:1682163‑M1/101‑71 (MQ=255) ccAGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaaca > 1:1693671‑M1/1‑31 (MQ=255) aGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaagaac > 2:830650‑M1/1‑29 (MQ=255) aGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaac > 1:698230‑M1/1‑29 (MQ=255) aGAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaac > 1:1475771‑M1/1‑29 (MQ=255) aGAACTGTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaac < 2:204936‑M1/101‑73 (MQ=255) gAACTTTAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaacc < 2:301775‑M1/101‑74 (MQ=255) ttAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccatttt < 1:602743‑M1/101‑79 (MQ=255) ttAGCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccatttt < 2:719892‑M1/101‑79 (MQ=255) gCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgat < 2:374204‑M1/101‑82 (MQ=255) gCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgat < 1:1270717‑M1/101‑82 (MQ=255) gCAACAACGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgat > 1:1509675‑M1/1‑20 (MQ=255) caacaaCGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatg < 2:552782‑M1/101‑83 (MQ=255) aacaacGCCCGCGCCAACggtacggccgccttcacggatttccaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgt > 1:1246297‑M1/1‑18 (MQ=255) aacaacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgt > 2:1355271‑M1/1‑18 (MQ=255) aacaacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgt < 2:978456‑M1/101‑84 (MQ=255) acaacGCCCGCGCCAGCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgtt < 2:1495939‑M1/101‑85 (MQ=255) acaacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgtt > 2:535001‑M1/1‑17 (MQ=255) acaacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgtt < 1:1093515‑M1/101‑85 (MQ=255) acaacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgtt < 2:1489462‑M1/101‑85 (MQ=255) acaacGCCCGCGCCAACggtacggccgcctacacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgtt < 2:1254307‑M1/101‑85 (MQ=255) caacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttg > 1:1087848‑M1/1‑16 (MQ=255) aacGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgt > 2:811667‑M1/1‑15 (MQ=255) acGCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtc < 2:698225‑M1/101‑88 (MQ=255) gCCCGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgc < 1:1682939‑M1/101‑90 (MQ=255) cccGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcc < 2:41497‑M1/101‑91 (MQ=255) ccGCGCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgccc > 2:723878‑M1/1‑10 (MQ=255) cgcgCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccg > 2:1357322‑M1/1‑9 (MQ=255) cgcgCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccg < 1:115397‑M1/101‑93 (MQ=255) cgcgCCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccg < 2:419542‑M1/101‑93 (MQ=255) gcgcCAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattnngatgtngtcgcccgg < 2:491756‑M1/101‑94 (MQ=255) ccAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcat > 1:286528‑M1/1‑5 (MQ=255) cAACggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggaggatcagggtaacaaccattttgatgttgtcgccccgcatt > 1:1244509‑M1/1‑4 (MQ=255) aaCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcatta < 2:1035934‑M1/101‑99 (MQ=255) aaCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcatta > 1:414430‑M1/1‑3 (MQ=255) aaCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcatta < 1:910548‑M1/101‑99 (MQ=255) aaCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcatta < 1:416918‑M1/101‑99 (MQ=255) aaCggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcatta < 1:811672‑M1/101‑99 (MQ=255) cggtacggccgccttcacggattgcgaaacgcagaccgtcgtccatcgcgatcgggtggatcagggtaacaaccattttgatgttgtcgcccggcattacc < 1:508510‑M1/101‑101 (MQ=255) | ACAGCCAACAAATGCAAAAAGGGCGCCGAAGCGCCC‑TTTTTAATTCGAAACTAATTAACGTGTAATTAGCCCAGAACTTTAGCAACAACGCCCGCGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 23/41086‑41186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |