| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 22 | = 41696 | 0 (0.000) | 59 (0.060) +CT |
41/196 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 22/41597‑41696 | tGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAAc < 2:1353186‑M1/101‑2 (MQ=255) cGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActt > 1:1481610‑M1/1‑98 (MQ=255) gTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActta > 1:192597‑M1/1‑97 (MQ=255) gTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActta > 2:503712‑M1/1‑97 (MQ=255) gTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActta > 1:545851‑M1/1‑97 (MQ=255) taaatTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactg < 2:108299‑M1/100‑8 (MQ=255) aaaTTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactga > 2:583217‑M1/1‑93 (MQ=255) aaaTTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactga > 1:1612747‑M1/1‑93 (MQ=255) aaaTTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGGGATGCTGCCAActtactga > 2:1138900‑M1/1‑93 (MQ=255) aTTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatt < 2:300294‑M1/101‑11 (MQ=255) ttGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgattt < 1:901320‑M1/101‑12 (MQ=255) gTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttag < 1:1595833‑M1/101‑14 (MQ=255) gTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttag > 2:407608‑M1/1‑88 (MQ=255) gTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttag > 1:388704‑M1/1‑88 (MQ=255) gAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatg < 1:963428‑M1/101‑20 (MQ=255) aaGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatga < 1:104699‑M1/101‑21 (MQ=255) aGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAGcttactgatttagtgtatgat > 2:1671484‑M1/1‑80 (MQ=255) gATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatg > 2:799731‑M1/1‑79 (MQ=255) cTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgt < 2:526531‑M1/101‑27 (MQ=255) tGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatagtgtt < 2:1140524‑M1/101‑28 (MQ=255) gACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgttt < 1:1660576‑M1/101‑29 (MQ=255) cTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgttttt < 2:366092‑M1/101‑31 (MQ=255) cTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgttttt < 2:1374372‑M1/101‑31 (MQ=255) aaTCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttga > 2:1366652‑M1/1‑69 (MQ=255) aaTCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttga < 2:1181493‑M1/101‑33 (MQ=255) ttccgatctagtgggatgtCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgag < 2:687722‑M1/92‑34 (MQ=255) aTCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgag < 2:1525628‑M1/101‑34 (MQ=255) tCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgagg < 2:1669736‑M1/101‑35 (MQ=255) cATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggt > 2:868948‑M1/1‑66 (MQ=255) cATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggt < 1:1080063‑M1/101‑36 (MQ=255) cATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggt < 1:285908‑M1/101‑36 (MQ=255) aTGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtg < 2:628399‑M1/101‑37 (MQ=255) tGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgc > 2:764473‑M1/1‑64 (MQ=255) aGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgagagatcggaa > 1:687727‑M1/1‑59 (MQ=255) tGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtg < 2:1492177‑M1/101‑45 (MQ=255) gATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 1:1598361‑M1/1‑54 (MQ=255) gATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggct < 2:80515‑M1/101‑48 (MQ=255) aCGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt < 1:126710‑M1/101‑55 (MQ=255) cGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc < 2:525947‑M1/101‑56 (MQ=255) gCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct < 1:1573216‑M1/101‑57 (MQ=255) gCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct > 2:1349818‑M1/1‑45 (MQ=255) cTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat < 1:963822‑M1/101‑59 (MQ=255) tCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca < 1:1380470‑M1/101‑61 (MQ=255) aGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct < 2:1558618‑M1/101‑64 (MQ=255) cAACATCATCGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc < 1:799736‑M1/101‑69 (MQ=255) atcatcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 2:545846‑M1/101‑73 (MQ=255) atcatcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct > 1:770776‑M1/1‑29 (MQ=255) atcatcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct > 2:665226‑M1/1‑29 (MQ=255) atcatcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct > 2:1353272‑M1/1‑29 (MQ=255) atcatcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 1:643150‑M1/101‑73 (MQ=255) tcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 2:791375‑M1/101‑77 (MQ=255) tcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 1:1113159‑M1/101‑77 (MQ=255) tcGTTTCGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 1:407613‑M1/101‑77 (MQ=255) cGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac < 1:1421330‑M1/101‑83 (MQ=255) cGACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac < 1:853725‑M1/101‑83 (MQ=255) gACGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact < 2:1566766‑M1/101‑84 (MQ=255) cGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctattagctgtccctcctgttcagctactga > 1:22308‑M1/1‑16 (MQ=255) cGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 1:572749‑M1/1‑16 (MQ=255) cGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 1:815967‑M1/1‑16 (MQ=255) cGGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 1:319606‑M1/1‑16 (MQ=255) | TGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCCAGATTCAACATCATCGTTTCGACGGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 22/41597‑41696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |