| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 215 | 1 = | 0 (0.000) | 42 (0.880) | 25/158 | 1.4 | 53.5% | intergenic (–/–) | –/– | –/– |
| ? | 91 | = 8391 | 73 (1.510) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAACCCGCTA > 215/1‑100 | cggacgtggttggctctgatgacaaacgccaaactgcctgatgcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgt < 2:712785‑M1/1‑1 (MQ=255) ggacgtggttggctctgatgacaaacgccaaactgcctgatgcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTa < 1:159102‑M1/2‑1 (MQ=255) ggacgtggttggctctgatgacaaacgccaaactgcctgatgcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTa < 2:265667‑M1/2‑1 (MQ=255) ggacgtggttggctctgatgacaaacgccaaactgcctgatgcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTa > 1:1622345‑M1/100‑101 (MQ=255) gcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAt > 2:872168‑M1/59‑101 (MQ=255) gcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAt > 2:795194‑M1/59‑101 (MQ=255) gcgctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAt > 2:597074‑M1/59‑101 (MQ=255) gctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTg > 1:712790‑M1/57‑101 (MQ=255) ctacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGc > 2:408729‑M1/56‑101 (MQ=255) tacgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCa > 2:205908‑M1/55‑101 (MQ=255) acgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCAc > 2:1095451‑M1/54‑101 (MQ=255) acgcttatcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCAc > 2:298880‑M1/54‑101 (MQ=255) tcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCa > 2:1340633‑M1/47‑101 (MQ=255) tcaggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCa > 2:251978‑M1/47‑101 (MQ=255) caggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAg < 2:1361948‑M1/56‑1 (MQ=255) caggcctacgcagctcctgcaatatattgaattttcatgcttttgTAGGACGGATAAGGCGTTCAGGCGGCATCCGGCATGAACAAATTGCACTTTGTCAg < 1:1192587‑M1/56‑1 (MQ=255) tacgcagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAAttt > 1:1180415‑M1/40‑101 (MQ=255) cagctcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGcc > 1:687526‑M1/36‑101 (MQ=255) tcctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCg < 2:1630622‑M1/70‑1 (MQ=255) cctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGt < 2:1282222‑M1/71‑1 (MQ=255) ctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTa < 1:1400145‑M1/72‑1 (MQ=255) ctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTa < 2:1160689‑M1/72‑1 (MQ=255) ctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTa < 2:1161285‑M1/72‑1 (MQ=255) ctgcaatatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTa < 2:1418414‑M1/72‑1 (MQ=255) aatatattgaattttcttgcttttgTAGGCCGGATAAGCCGTTCACGCCGCATCCGGCATGACCAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAat > 1:1055525‑M1/26‑101 (MQ=255) tatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAatat < 1:354928‑M1/78‑1 (MQ=255) tatattgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAatat > 1:529266‑M1/24‑101 (MQ=255) tattgaattttcatgcttttgGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATaa < 2:48951‑M1/80‑1 (MQ=255) attgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAAc > 1:130492‑M1/21‑101 (MQ=255) attgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAAc > 1:1086086‑M1/21‑101 (MQ=255) ttgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAAcc > 2:809266‑M1/20‑101 (MQ=255) tgaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCa < 2:833004‑M1/83‑1 (MQ=255) gaattttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCAt < 2:290628‑M1/84‑1 (MQ=255) attttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTc < 2:829598‑M1/86‑1 (MQ=255) ttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAAt > 2:1667763‑M1/13‑101 (MQ=255) ttcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAAt > 1:479450‑M1/13‑101 (MQ=255) tcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATa > 1:254506‑M1/12‑101 (MQ=255) tcatgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATa < 1:828123‑M1/90‑1 (MQ=255) catgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATaa < 1:1634507‑M1/91‑1 (MQ=255) tgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATaaaa > 1:1566863‑M1/9‑101 (MQ=255) tgcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATaaaa > 2:288619‑M1/9‑101 (MQ=255) gcttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAAc < 1:77266‑M1/94‑1 (MQ=255) cttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAAcc < 2:658164‑M1/95‑1 (MQ=255) ttttgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAAccc < 2:938184‑M1/96‑1 (MQ=255) tgTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAACCCGCt > 1:1244507‑M1/3‑101 (MQ=255) gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAACCCGCTa < 2:1630900‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAATTGCACTTTGTCAGCAATTTGGCCCCCGTAAAATATAACCATTCAATAAAACCCGCTA > 215/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |